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releasing minor 1.4.2 [rebase & merge] #2735

Merged
merged 41 commits into from
Sep 13, 2024
Merged

releasing minor 1.4.2 [rebase & merge] #2735

merged 41 commits into from
Sep 13, 2024

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@Borda Borda commented Sep 11, 2024 •
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What does this PR do?

Resolves #2734

Before submitting
  • Was this discussed/agreed via a Github issue? (no need for typos and docs improvements)
  • Did you read the contributor guideline, Pull Request section?
  • Did you make sure to update the docs?
  • Did you write any new necessary tests?
PR review

Anyone in the community is free to review the PR once the tests have passed.
If we didn't discuss your PR in Github issues there's a high chance it will not be merged.

Did you have fun?

Make sure you had fun coding 🙃

📚 Documentation preview 📚: https://torchmetrics--2735.org.readthedocs.build/en/2735/

Borda and others added 27 commits September 11, 2024 17:34
@Borda
ci: prune testing matrix & set PT 2.4 as stable (#2670)
3543989 
---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
(cherry picked from commit 6a2fc72)
@Borda
tests: flaky test_support_for_int (#2672)
f46a151 
(cherry picked from commit 4d1a2e2)
@Borda
docs: update chlog after 1.4.1
7794605
@Borda
lint: resolve potential conflicted rules
8a0d024 
(cherry picked from commit d313af6)
@dependabot @Borda
build(deps): bump mypy from 1.11.0 to 1.11.1 in /requirements (#2677)
fb5ec39 
Bumps [mypy](https://github.com/python/mypy) from 1.11.0 to 1.11.1.
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@v1.11...v1.11.1)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit f697f35)
@dependabot @Borda
build(deps): update regex requirement from <=2024.5.15,>=2021.9.24 to…
e5815c8 
… >=2021.9.24,<=2024.7.24 in /requirements (#2676)

build(deps): update regex requirement in /requirements

Updates the requirements on [regex](https://github.com/mrabarnett/mrab-regex) to permit the latest version.
- [Changelog](https://github.com/mrabarnett/mrab-regex/blob/hg/changelog.txt)
- [Commits](mrabarnett/mrab-regex@2021.11.10...2024.7.24)

---
updated-dependencies:
- dependency-name: regex
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 1771806)
@dependabot @Borda
build(deps): bump cachier from 3.0.0 to 3.0.1 in /requirements (#2678)
244fd7a 
Bumps [cachier](https://github.com/python-cachier/cachier) from 3.0.0 to 3.0.1.
- [Release notes](https://github.com/python-cachier/cachier/releases)
- [Commits](python-cachier/cachier@v3.0.0...v3.0.1)

---
updated-dependencies:
- dependency-name: cachier
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 3f78f02)
@dependabot @Borda
build(deps): update transformers requirement from <4.43.0,>4.4.0 to >…
d702799 
…4.4.0,<4.44.0 in /requirements (#2679)

build(deps): update transformers requirement in /requirements

Updates the requirements on [transformers](https://github.com/huggingface/transformers) to permit the latest version.
- [Release notes](https://github.com/huggingface/transformers/releases)
- [Commits](huggingface/transformers@v4.42.3...v4.43.4)

---
updated-dependencies:
- dependency-name: transformers
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 7fee50d)
@dependabot @Borda
build(deps): update transformers requirement from <4.43.0,>=4.42.3 to…
f1a53fd 
… >=4.42.3,<4.45.0 in /requirements (#2681)

build(deps): update transformers requirement in /requirements

Updates the requirements on [transformers](https://github.com/huggingface/transformers) to permit the latest version.
- [Release notes](https://github.com/huggingface/transformers/releases)
- [Commits](huggingface/transformers@v4.42.3...v4.44.0)

---
updated-dependencies:
- dependency-name: transformers
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 2d9c009)
@Borda
fix(ci): resolve broken cache cleaning over several updates (#2682)
d02c4b5 
(cherry picked from commit baf826b)
@dependabot @Borda
build(deps): update pytorch-lightning requirement from <2.4.0,>=1.9.0…
6968e6d 
… to >=1.9.0,<2.5.0 in /requirements (#2687)

build(deps): update pytorch-lightning requirement in /requirements

Updates the requirements on [pytorch-lightning](https://github.com/Lightning-AI/lightning) to permit the latest version.
- [Release notes](https://github.com/Lightning-AI/lightning/releases)
- [Commits](Lightning-AI/pytorch-lightning@1.9.0...2.4.0)

---
updated-dependencies:
- dependency-name: pytorch-lightning
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit fd5a0b2)
@dependabot @Borda
build(deps): update netcal requirement from <=1.3.5,>1.0.0 to >1.0.0,…
71c7a47 
…<1.4.0 in /requirements (#2690)

* build(deps): update netcal requirement in /requirements

Updates the requirements on [netcal](https://github.com/EFS-OpenSource/calibration-framework) to permit the latest version.
- [Release notes](https://github.com/EFS-OpenSource/calibration-framework/releases)
- [Commits](EFS-OpenSource/calibration-framework@r1.1...r1.3.6)

---
updated-dependencies:
- dependency-name: netcal
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* Apply suggestions from code review

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Jirka Borovec <[email protected]>
(cherry picked from commit 6b06188)
@dependabot @Borda
build(deps): bump pandoc from 2.3 to 2.4 in /requirements (#2696)
bb2b2b7 
Bumps [pandoc](https://github.com/boisgera/pandoc) from 2.3 to 2.4.
- [Release notes](https://github.com/boisgera/pandoc/releases)
- [Changelog](https://github.com/boisgera/pandoc/blob/master/mkdocs/changelog.md)
- [Commits](boisgera/pandoc@v2.3...v2.4)

---
updated-dependencies:
- dependency-name: pandoc
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

(cherry picked from commit eb66001)
@dependabot @Borda
build(deps): update numpy requirement from <2.1.0 to <2.2.0 in /requi…
a49177d 
…rements (#2695)

build(deps): update numpy requirement in /requirements

Updates the requirements on [numpy](https://github.com/numpy/numpy) to permit the latest version.
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v1.20.1...v2.1.0)

---
updated-dependencies:
- dependency-name: numpy
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 4b43756)
@dependabot @Borda
build(deps): update lightning requirement from <2.4.0,>=1.8.0 to >=1.…
452567c 
…8.0,<2.5.0 in /requirements (#2694)

build(deps): update lightning requirement in /requirements

Updates the requirements on [lightning](https://github.com/Lightning-AI/lightning) to permit the latest version.
- [Release notes](https://github.com/Lightning-AI/lightning/releases)
- [Commits](Lightning-AI/pytorch-lightning@1.8.0...2.4.0)

---
updated-dependencies:
- dependency-name: lightning
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 06201a2)
@Borda
docs: update bug template
7f2d9df 
(cherry picked from commit 24e99c5)
@dependabot @Borda
build(deps): bump mypy from 1.11.1 to 1.11.2 in /requirements (#2699)
eef357b 
Bumps [mypy](https://github.com/python/mypy) from 1.11.1 to 1.11.2.
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@v1.11.1...v1.11.2)

---
updated-dependencies:
- dependency-name: mypy
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit f214812)
@dependabot @Borda
build(deps): bump pygithub from 2.3.0 to 2.4.0 in /requirements (#2700)
34bef4a 
Bumps [pygithub](https://github.com/pygithub/pygithub) from 2.3.0 to 2.4.0.
- [Release notes](https://github.com/pygithub/pygithub/releases)
- [Changelog](https://github.com/PyGithub/PyGithub/blob/main/doc/changes.rst)
- [Commits](PyGithub/PyGithub@v2.3.0...v2.4.0)

---
updated-dependencies:
- dependency-name: pygithub
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit c3b8945)
@dependabot @Borda
build(deps): update nltk requirement from <=3.8.1,>=3.6 to >=3.6,<=3.…
b7d724b 
…9.1 in /requirements (#2693)

* build(deps): update nltk requirement in /requirements

Updates the requirements on [nltk](https://github.com/nltk/nltk) to permit the latest version.
- [Changelog](https://github.com/nltk/nltk/blob/develop/ChangeLog)
- [Commits](nltk/nltk@3.6...3.9.1)

---
updated-dependencies:
- dependency-name: nltk
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>

* fix source

* update requirements

* skip flaky stuff

* skip more flaky stuff

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Nicki Skafte <[email protected]>
(cherry picked from commit ef22554)
@Borda
text: re-adding Chrf implementation (#2701)
5980b70 
* update licence

This reverts commit 663f06d.

---------

Co-authored-by: Maja Popovic <[email protected]>
(cherry picked from commit 773fb92)
@Borda
tests: move reset seed to fixture [1/2] (#2702)
e129162 
* move reset seed to fixture
* updating test outputs
* Update src/conftest.py

(cherry picked from commit 79b33ce)
@Borda
tests: move reset seed to fixture [2/2] (#2706)
b89ac5f 
(cherry picked from commit 7fc4177)
@dependabot @Borda
build(deps): bump pypa/gh-action-pypi-publish from 1.9.0 to 1.10.0 (#…
2a4bb2e 
…2711)

Bumps [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) from 1.9.0 to 1.10.0.
- [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases)
- [Commits](pypa/gh-action-pypi-publish@v1.9.0...v1.10.0)

---
updated-dependencies:
- dependency-name: pypa/gh-action-pypi-publish
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 1e822ab)
@SkafteNicki @Borda
Fix flakyness in tests related to torch.unique with dim=None (#2650)
e509f6e 
* correct check
* found the problem

---------

Co-authored-by: Jirka Borovec <[email protected]>
Co-authored-by: jirka <[email protected]>
(cherry picked from commit 0313c6b)
@Borda
bump/ci: utilities to 0.11.7 (#2712)
7ead13d 
(cherry picked from commit c8ebda5)
@dependabot @Borda
build(deps): bump lightning-utilities from 0.11.6 to 0.11.7 in /requi…
9d8e877 
…rements (#2716)

build(deps): bump lightning-utilities in /requirements

Bumps [lightning-utilities](https://github.com/Lightning-AI/utilities) from 0.11.6 to 0.11.7.
- [Release notes](https://github.com/Lightning-AI/utilities/releases)
- [Changelog](https://github.com/Lightning-AI/utilities/blob/main/CHANGELOG.md)
- [Commits](Lightning-AI/utilities@v0.11.6...v0.11.7)

---
updated-dependencies:
- dependency-name: lightning-utilities
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 8bce5d0)
@dependabot @Borda
build(deps): update dython requirement from <=0.7.6 to <=0.7.7 in /re…
b864ab3 
…quirements (#2717)

build(deps): update dython requirement in /requirements

Updates the requirements on [dython](https://github.com/shakedzy/dython) to permit the latest version.
- [Release notes](https://github.com/shakedzy/dython/releases)
- [Changelog](https://github.com/shakedzy/dython/blob/master/CHANGELOG.md)
- [Commits](shakedzy/dython@0.1.0...v0.7.7)

---
updated-dependencies:
- dependency-name: dython
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit a31417c)
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codecov bot commented Sep 11, 2024 •
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Codecov Report

Attention: Patch coverage is 79.26267% with 45 lines in your changes missing coverage. Please review.

Project coverage is 69%. Comparing base (59d67ef) to head (8d139a5).
Report is 41 commits behind head on release/stable.

Additional details and impacted files 
@@               Coverage Diff               @@
##           release/stable   #2735    +/-   ##
===============================================
  Coverage              69%     69%            
===============================================
  Files                 313     326    +13     
  Lines               17505   17825   +320     
===============================================
+ Hits                12041   12340   +299     
- Misses               5464    5485    +21

Borda and others added 10 commits September 11, 2024 19:37
@Borda
docs: freeze numpy <2.0 for pesq
191c84b
@SkafteNicki @Borda
Integration test for MetricCollection, ClasswiseWrapper and `self…
ce2195c 
….log_dict` method (#2720)

* integration test
* batch_idx missing

(cherry picked from commit 1ba2c85)
@SkafteNicki @Borda
docs: add another pitfall that can happen when using rank_zero_only…
5ae7385 
… decorator in lightning (#2719)

* fix docs
* missing import
* Apply suggestions from code review

---------

Co-authored-by: Jirka Borovec <[email protected]>
(cherry picked from commit 858096c)
@SkafteNicki @Borda
Correct tags in documentation (#2724)
0866753 
fix

(cherry picked from commit 45a41b8)
@petertheprocess @Borda
correct the padding related calculation errors in SSIM (#2721)
a9e993e 
* correct the padding related calculation errors in SSIM

* fix doctests

* changelog

* change test

* add test

* fix syntax in test_ssim.py

* fix syntax in test_ssim.py

* fix unittests

* fix tolerance

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Nicki Skafte Detlefsen <[email protected]>
Co-authored-by: mergify[bot] <37929162+mergify[bot]@users.noreply.github.com>
(cherry picked from commit efdb111)
@Borda
docs: fix link to WIP
1508a4b 
(cherry picked from commit 2cd6f6a)
@dependabot @Borda
build(deps): bump torch from 2.4.0 to 2.4.1 in /requirements (#2729)
cc29c2a 
Bumps [torch](https://github.com/pytorch/pytorch) from 2.4.0 to 2.4.1.
- [Release notes](https://github.com/pytorch/pytorch/releases)
- [Changelog](https://github.com/pytorch/pytorch/blob/main/RELEASE.md)
- [Commits](pytorch/pytorch@v2.4.0...v2.4.1)

---
updated-dependencies:
- dependency-name: torch
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
(cherry picked from commit 144f6d6)
@SkafteNicki @Borda
Fix how prefix/posfix works in MultitaskWrapper (#2722)
4c77453 
* implementation
* tests
* changelog
* fix mypy

(cherry picked from commit eecc55b)
@rittik9 @Borda
Fix: handle zero division error in binary IoU calculation (#2726)
f056ad6 
* Fix: Handle zero division error in binary IoU (Jaccard index) calculation
* chlog

---------

Co-authored-by: Jirka Borovec <[email protected]>
(cherry picked from commit 80929b5)
@Borda
fix: compatibility audio do with new scipy (#2733)
42fe2c8 
* compatibility audio do with new `scipy`
* smaller array to fix torch.unique case

---------

Co-authored-by: Nicki Skafte Detlefsen <[email protected]>
(cherry picked from commit f12e7af)
@github-actions github-actions bot added the documentation Improvements or additions to documentation label Sep 11, 2024
Borda and others added 2 commits September 12, 2024 00:14
@Borda
bump some testing requirements (#2736)
1fcbeaf 
* bump some testing requirements
+ matplotlib >=3.6.0
+ dython ~=0.7.6

(cherry picked from commit 708f11d)
@vkinakh @Borda
Fix segmentation.MeanIoU (#2698)
d921be3 
- use sum reduce function for score
- add state `num_batches` to keep number of processed batches
- add increment of `num_batches` in every `update` call
- in `compute` return sum of scores divided by number of processed batches

---------

Co-authored-by: Nicki Skafte <[email protected]>
(cherry picked from commit cb1ab37)
@Borda Borda changed the title releasing minor 1.4.2 [wip] releasing minor 1.4.2 [rebase & merge] Sep 12, 2024
@mergify mergify bot added the ready label Sep 12, 2024
@Borda
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Borda commented Sep 12, 2024

waiting for #2739

@Borda Borda merged commit 00e0cc1 into release/stable Sep 13, 2024
62 of 66 checks passed
@Borda Borda deleted the releasing/1.4.2 branch September 13, 2024 16:24
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@Borda @SkafteNicki @petertheprocess @rittik9 @vkinakh