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  1. pySCENIC pySCENIC Public

    Forked from aertslab/pySCENIC

    pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene reg…

    Python

  2. SCP SCP Public

    Forked from zhanghao-njmu/SCP

    An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

    R

  3. TimiGP TimiGP Public

    Forked from CSkylarL/TimiGP

    An R package to infer cell-cell interactions and clinical values in tumor immune microenvironment through gene pairs.

    R

  4. scRNAseq_analysis_vignette scRNAseq_analysis_vignette Public

    Forked from quadbio/scRNAseq_analysis_vignette

    Tutorial for scRNA-seq data analysis beginners using R

  5. scPLC scPLC Public

    Forked from meta-cancer/scPLC

    Codes for the scPLC project

    R

  6. TCM TCM Public

    Forked from Coolgenome/TCM

    Codes used in pan-T cell analysis

    R