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39 Open 106 Closed
39 Open 106 Closed
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Issues list

Why does rSPR generate multifurcating trees sometimes?
#181 opened Dec 9, 2024 by teng-gao
How are missing/ambiguous data handled?
#180 opened Dec 9, 2024 by wzbillings
Release phangorn 2.12.2
#179 opened Nov 8, 2024 by KlausVigo
1 of 17 tasks
libgfortran issues
#178 opened Nov 3, 2024 by mretier
1
ancestral.pml gives NaN values
#176 opened Oct 8, 2024 by kbhoehn
1
Suggestion/request for bab (branch and bound) function when runtime is long
#175 opened Sep 18, 2024 by bbitarello
3
Consistency Index error
#173 opened Aug 31, 2024 by kr3118
1
Inquiry About Setting Character Weights in optim.parsimony Function
#172 opened Aug 30, 2024 by Xinru99
2
Simulate coding nucleotide sequences
#167 opened Jun 6, 2024 by trilisser
fix labels land plot margins in plot.networx
#166 opened Jun 3, 2024 by KlausVigo
@KlausVigo
ancestral.pars differences between 2.11.1 and 3.0.0
#165 opened May 22, 2024 by colejensen
Single data point causes BAB function to return error
#163 opened Mar 8, 2024 by spetersongit
1
Error message 'R session aborted' when running modelTest(primates)
#157 opened Dec 15, 2023 by Zhangvvv
2
library(phangorn) error
#153 opened Oct 16, 2023 by wang0430
3
pml segfault: memory not mapped
#149 opened Jun 22, 2023 by lemmonquiche
3
Data availability
#148 opened May 17, 2023 by Neclow
pml() segfault: memory not mapped
#144 opened Jan 18, 2023 by iferres
2
How can I access the probabilities using ancestral pml of entire sequence
#132 opened Oct 12, 2022 by xbonner13
Ancestral Sequence Reconstruction with ancestral.pml
#131 opened Sep 7, 2022 by MarStreicher
3
Phangorn distance functions crash R with segmentation fault when alignment contains missing values.
#125 opened Feb 17, 2022 by ejurga
2
Assigning different Q matrices to different morphological characters
#106 opened Jan 6, 2021 by JMoysiuk
[conda] r-phangorn misses depenency openblas
#99 opened Jun 15, 2020 by lmuenter
2
Phangorn with binary state data generates error with modelTest and warning with optim.pml
#98 opened Jun 11, 2020 by fpbarthel
optim.pml()
#89 opened Oct 18, 2019 by JacobAFW
unexpected tiplabels behavior using network imported from splitstree
#88 opened Oct 16, 2019 by tim-oconnor
1
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