Fix bug on parsing exponent qual

KewinOgink · Mar 31, 2020 · cb16485 · cb16485
1 parent 3e76b4c
commit cb16485
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/clair/post_processing/overlap_variant.py b/clair/post_processing/overlap_variant.py
@@ -165,7 +165,7 @@ def variant_from(variant_row):
     alternate_base = alternates[0]
     alternate_base_multi = None if len(alternates) == 1 else alternates[1]
 
-    quality_score = int(columns[5])
+    quality_score = int(float(columns[5]))
 
     last_column = columns[-1]
     last_columns = last_column.split(":")