Skip to content

KeaunAmani/cbp60db

Repository files navigation

CBP60-DB Web Application Source Code

A Plant Kingdom-Wide Structural Database of the CBP60 Protein Family.

This database features more than 2,000 proteins of the CBP60 family in the plant kingdom. Deep learning-predicted structures, cDNA/amino acid sequences, species of origin, and access to external protein motif/domain analyses are provided.

If you find the contents of our database or the software useful please cite our biorxiv preprint.

Important Links:

Local Setup

Requires golang to be installed https://go.dev/

# clone the repository
git clone https://github.com/KeaunAmani/cbp60db.git

# go into main directory
cd cbp60db

# extract the TM-Align matrix
tar -xf tm-matrix.json.tar.bz2

# build binary
go build main.go

# execute binary locally for access via port 8002
./main

If you choose to daemonize the service with systemd use the cbb60db.service file and configure each line that contains a #TODO. Descriptions are provided for each line.

About

Source code for the CBP60-DB Web application.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published