key-value-store implemented on sqlite3

[ShuntaroAoki]

No description provided.

[github-actions]

Coverage Report

File	Stmts	Miss	Cover	Missing
bdpy/bdata
bdata.py	399	319	20%	73–79, 86, 90, 95, 99, 104, 109, 113, 118, 122, 132–134, 155–172, 190, 206–207, 232–248, 252–262, 276–277, 293, 310, 314, 318–356, 388–477, 508, 539, 547–551, 560, 577–584, 589–598, 604–614, 618, 622–625, 628, 632–653, 656–665, 668–677, 683–691, 696–729, 735–744, 750–757, 761–767, 771–799, 803–824, 828–862, 866–868, 872–874, 878–887
featureselector.py	64	57	11%	43–47, 52–93, 98–124
metadata.py	67	48	28%	21–30, 34, 38, 42, 46, 50, 54, 74–115, 135–144, 149, 154
utils.py	113	103	9%	44–110, 127–173, 201, 217–253, 258, 263
bdpy/dataform
datastore.py	107	85	21%	59–75, 90–93, 97–98, 102–113, 116–119, 122–127, 131–132, 137–158, 190–197, 222–259, 262–265
features.py	298	233	22%	29–32, 41–47, 74–103, 107, 111, 115, 119, 137–163, 168–197, 213–238, 241–269, 272–275, 278–289, 305–319, 323, 327, 331, 335, 339, 343, 347, 351, 355, 359, 364–394, 398–418, 422–462, 465, 470–477, 491–493, 496–499, 502–505, 508–512, 515–516, 536–549
kvs.py	140	140	0%	4–272
pd.py	9	5	44%	25–27, 43–44
sparse.py	67	51	24%	19–29, 35–46, 52–58, 65–74, 78, 81–87, 90–93, 96–98, 101–126
utils.py	12	12	0%	3–18
bdpy/dataset
utils.py	45	45	0%	3–98
bdpy/distcomp
distcomp.py	92	78	15%	20–29, 32–49, 52–70, 73–93, 96–107, 111, 114–117, 121–127
bdpy/dl
caffe.py	60	60	0%	4–129
bdpy/dl/torch
base.py	43	24	44%	31–41, 48, 54, 60, 63, 73–83, 90, 96, 102, 105
models.py	333	298	11%	28–84, 114–140, 148–169, 175–238, 249–253, 259–279, 288–292, 297–316, 327–331, 340–405, 427–431, 442–494, 515–517, 528–587, 611–614, 625–684, 708–711, 722–771, 790–793, 804–853, 872–875
torch.py	109	84	23%	40–57, 60, 77–95, 100, 107, 110, 115, 122, 125, 172–202, 205, 208–220, 223–258
bdpy/evals
metrics.py	95	87	8%	12–34, 40–73, 82–112, 118–159, 172–179
bdpy/feature
feature.py	30	28	7%	33–74
bdpy/fig
__init__.py	4	4	0%	6–9
draw_group_image_set.py	90	90	0%	3–182
fig.py	88	88	0%	16–164
makeplots.py	336	336	0%	1–729
tile_images.py	59	59	0%	1–193
bdpy/ml
crossvalidation.py	59	54	8%	34–61, 104–128, 138, 164–196
ensemble.py	13	9	31%	33–46
learning.py	308	264	14%	43–44, 48, 52, 59, 91–104, 109–125, 128, 158–170, 184–209, 260–284, 290–433, 436–461, 465–504, 507–508, 524–536, 541–613
model.py	140	120	14%	29–39, 54–70, 86–144, 156–169, 184–222, 225, 230–250, 254–258, 271–285
regress.py	11	8	27%	29–38
searchlight.py	16	13	19%	32–51
bdpy/mri
fmriprep.py	497	451	9%	25–34, 38, 44–62, 65–75, 78–89, 92–160, 163–194, 230–360, 367–380, 384, 388–390, 394, 398–400, 410–434, 437–454, 457–464, 471–472, 475–491, 494, 498, 502–815, 819–831, 842–862
glm.py	40	36	10%	46–95
image.py	24	19	21%	29–54
load_epi.py	28	18	36%	36–50, 56–63, 82–88
load_mri.py	19	16	16%	16–36
roi.py	248	234	6%	37–100, 122–148, 165–235, 241–314, 320–387, 399–466, 473–499
spm.py	158	139	12%	26–155, 162–166, 170, 174–179, 183–300
bdpy/opendata
__init__.py	1	1	0%	1
openneuro.py	210	210	0%	1–329
bdpy/pipeline
config.py	36	29	19%	15–64
bdpy/preproc
interface.py	52	44	15%	31–40, 60–69, 96–105, 111–123, 148–157, 208–217
preprocessor.py	129	107	17%	35, 43–65, 74–78, 85–97, 104–132, 138–189, 196–227, 234–239
select_top.py	23	18	22%	35–60
util.py	6	2	67%	14, 22
bdpy/recon
utils.py	55	55	0%	4–146
bdpy/recon/torch
__init__.py	1	1	0%	1
icnn.py	161	161	0%	15–478
bdpy/stats
corr.py	43	38	12%	29–77, 96–112
bdpy/util
info.py	47	36	23%	19–79
math.py	13	10	23%	23–38
utils.py	36	26	28%	48–66, 93–96, 116–121, 137–145
TOTAL	5068	4453	12%

Tests	Skipped	Failures	Errors	Time
1	0 💤	0 ❌	1 🔥	4.401s ⏱️