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A factor analysis package

C++ 97 39 Updated May 8, 2012

GTEx & TOPMed data production and analysis pipelines

Python 354 177 Updated Dec 16, 2024

Effective Computing—Resources for Computational Biologists

25 4 Updated Apr 17, 2020

Resources (software, data, research article) in the field of statistical genetics

39 15 Updated Jun 19, 2023

Tutorials for statistical genetics short courses

Dockerfile 33 23 Updated Jan 22, 2025

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

HTML 1,868 14,683 Updated Jul 24, 2022

A tutorial for data preprocessing and visualization using Python

Jupyter Notebook 2 2 Updated Jul 31, 2018

3rd ASTERICS-OBELICS International School

Jupyter Notebook 19 22 Updated Jan 27, 2023

Obstacle course for learning debugging in Python

HTML 35 16 Updated Dec 28, 2024

Datasets used in the book Hands-On Machine Learning with Scikit-Learn, Keras & TensorFlow

89 70 Updated Jan 18, 2025

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

Jupyter Notebook 8,321 3,360 Updated Oct 8, 2024

Code examples in pyTorch and Tensorflow for CS230

Python 3,981 1,000 Updated Mar 24, 2023

CRAN Task View: Machine Learning & Statistical Learning

10 6 Updated Oct 18, 2024

MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

Jupyter Notebook 2,692 1,541 Updated Aug 26, 2024

Code repository for the critical data book

MATLAB 73 52 Updated Nov 19, 2019

CELLECT (CELL-type Expression-specific integration for Complex Traits)

Python 74 21 Updated Aug 16, 2024
R 1 Updated Oct 21, 2024

LD Score Regression (LDSC)

Python 666 347 Updated Aug 16, 2024

Package providing an interface between HDF5 and R

R 61 22 Updated Jan 13, 2025

R-package for structural equation modeling based on GWAS summary data

R 217 56 Updated Dec 19, 2024

Identifying latent genetics interactions in genome-wide association studies using multiple traits

C++ 2 Updated Aug 15, 2023

Paper discribing LDpred2

TeX 16 12 Updated Oct 20, 2022

QQ plot from PLINK assoc format

R 7 2 Updated Nov 16, 2016
R 102 68 Updated Jan 21, 2025

R package for statistical tools with big matrices stored on disk.

R 179 30 Updated Sep 9, 2024

A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models

Python 58 6 Updated May 24, 2024
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