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Update README.md (#408) #1

Update README.md (#408)

Update README.md (#408) #1

Workflow file for this run

name: build
on:
push:
pull_request:
schedule:
- cron: '0 15 * * *'
jobs:
build-linux:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -el {0}
steps:
- name: Checkout code
uses: actions/checkout@v4
with:
submodules: 'true'
- name: Setup Conda
uses: conda-incubator/setup-miniconda@v3
with:
activate-environment: forte
environment-file: environment.yml
channels: conda-forge
show-channel-urls: true
python-version: '3.11'
auto-activate-base: false
add-pip-as-python-dependency: true
- name: Get ambit cache key
id: get-ambit-key
run: |
echo "key=$(git ls-remote https://github.com/jturney/ambit.git refs/heads/master | awk '{print $1}')" >> $GITHUB_OUTPUT
shell: bash
- name: Restore ambit
uses: actions/cache/restore@v4
id: cache-restore-ambit
with:
path: |
~/bin/ambit
key: ${{ runner.os }}-${{ runner.arch }}-ambit-${{ steps.get-ambit-key.outputs.key }}
- name: Install ambit
if: steps.cache-restore-ambit.outputs.cache-hit != 'true'
run: |
conda info
conda list
cd $HOME
git clone https://github.com/jturney/ambit.git
cd ambit
cmake -H. -Bobjdir -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=$HOME/bin/ambit
cd objdir
make -j4
make install
- name: Cache ambit
uses: actions/cache/save@v4
with:
path: |
~/bin/ambit
key: ${{ runner.os }}-${{ runner.arch }}-ambit-${{ steps.get-ambit-key.outputs.key }}
- name: Get Psi4 cache key
id: get-psi4-key
run: |
echo "key=$(git ls-remote https://github.com/psi4/psi4.git refs/heads/master | awk '{print $1}')" >> $GITHUB_OUTPUT
shell: bash
- name: Restore Psi4
uses: actions/cache/restore@v4
id: cache-restore-psi4
with:
path: |
~/psi4
key: ${{ runner.os }}-${{ runner.arch }}-psi4-${{ steps.get-psi4-key.outputs.key }}
- name: Compile Psi4
if: steps.cache-restore-psi4.outputs.cache-hit != 'true'
run: |
cd $HOME
git clone https://github.com/psi4/psi4.git
cd psi4
git pull origin master --tags
git fetch origin "refs/tags/*:refs/tags/*"
cmake -H. -Bobjdir -DCMAKE_BUILD_TYPE=Debug -DCMAKE_INSTALL_PREFIX=$HOME/psi4bin -DENABLE_ecpint=ON
cd objdir
make -j4
- name: Cache Psi4
uses: actions/cache/save@v4
with:
path: |
~/psi4
key: ${{ runner.os }}-${{ runner.arch }}-psi4-${{ steps.get-psi4-key.outputs.key }}
- name: Get block2 cache key
id: get-block2-key
run: |
echo "key=$(git ls-remote https://github.com/block-hczhai/block2-preview.git refs/heads/master | awk '{print $1}')" >> $GITHUB_OUTPUT
shell: bash
- name: Restore block2
uses: actions/cache/restore@v4
id: cache-restore-block2
with:
path: |
~/block2-bin
~/block2-preview
key: ${{ runner.os }}-${{ runner.arch }}-block2-${{ steps.get-block2-key.outputs.key }}
- name: Compile block2
if: steps.cache-restore-block2.outputs.cache-hit != 'true'
env:
BLAS_ROOT: $
run: |
cd $HOME
git clone https://github.com/block-hczhai/block2-preview.git
mkdir -p block2-preview/build
cd block2-preview/build
cmake .. -DBUILD_CLIB=ON \
-DCMAKE_BUILD_TYPE=Release \
-DLARGE_BOND=ON \
-DMPI=OFF \
-DCMAKE_INSTALL_PREFIX=${HOME}/block2-bin
make -j4 install
- name: Cache block2
uses: actions/cache/save@v4
with:
path: |
~/block2-bin
~/block2-preview
key: ${{ runner.os }}-${{ runner.arch }}-block2-${{ steps.get-block2-key.outputs.key }}
- name: Compile Forte
id: compile-forte
run: |
export PYTHONPATH=$PYTHONPATH:$HOME/psi4/objdir/stage/lib:$HOME/bin/ambit/lib
export AMBITPATH=$HOME/bin/ambit
export PATH=$PATH:$HOME/psi4/objdir/stage/bin
ambit_dir=$HOME/bin/ambit/share/cmake/ambit/
build_type=Release
cd $HOME/work/forte/forte
cmake_psi4=`psi4 --plugin-compile`
$cmake_psi4 \
-Dambit_DIR=$ambit_dir \
-DCMAKE_BUILD_TYPE=$build_type \
-Dblock2_DIR=${HOME}/block2-bin/share/cmake/block2 \
-DENABLE_block2=ON \
-DMAX_DET_ORB=128 \
-DPYTHON_EXECUTABLE="${CONDA_PREFIX}/bin/python" \
-DENABLE_ForteTests=TRUE
make -j4
pip list
- name: Run Forte methods tests
if: steps.compile-forte.outcome == 'success' && '!cancelled()'
run: |
export PYTHONPATH=$PYTHONPATH:$HOME/psi4/objdir/stage/lib:$HOME/bin/ambit/lib:$PYTHONPATH:$HOME/work/forte/forte
export AMBITPATH=$HOME/bin/ambit
export PATH=$PATH:$HOME/psi4/objdir/stage/bin
export OPENBLAS_NUM_THREADS=1
lscpu
export CPUTYPE=$(lscpu | grep 'Vendor ID' | awk '{print $3}')
echo $CPUTYPE
if [ "$CPUTYPE" = "AuthenticAMD" ]; then
echo "int mkl_serv_intel_cpu_true() { return 1; }" > fixcpu.c
gcc -shared -fPIC -o libfixcpu.so fixcpu.c
fi
export CPUTYPE=$(lscpu | grep 'Vendor ID' | awk '{print $3}')
if [ "$CPUTYPE" = "AuthenticAMD" ]; then
export LD_PRELOAD=$PWD/libfixcpu.so
fi
cd $HOME/work/forte/forte/tests/methods
python run_forte_tests.py --failed_dump --bw
- name: Run Forte pytest tests
if: steps.compile-forte.outcome == 'success' && '!cancelled()'
run: |
export PYTHONPATH=$PYTHONPATH:$HOME/psi4/objdir/stage/lib:$HOME/bin/ambit/lib:$PYTHONPATH:$HOME/work/forte/forte
export AMBITPATH=$HOME/bin/ambit
export PATH=$PATH:$HOME/psi4/objdir/stage/bin
export OPENBLAS_NUM_THREADS=1
cd $HOME/work/forte/forte/tests/pytest
pytest -v
- name: Run Forte pytest methods tests
if: steps.compile-forte.outcome == 'success' && '!cancelled()'
run: |
export PYTHONPATH=$PYTHONPATH:$HOME/psi4/objdir/stage/lib:$HOME/bin/ambit/lib:$PYTHONPATH:$HOME/work/forte/forte
export AMBITPATH=$HOME/bin/ambit
export PATH=$PATH:$HOME/psi4/objdir/stage/bin
export OPENBLAS_NUM_THREADS=1
cd $HOME/work/forte/forte/tests/pytest-methods
pytest -v
- name: Run Forte pytest block2 test
if: steps.compile-forte.outcome == 'success' && '!cancelled()'
run: |
export PYTHONPATH=$PYTHONPATH:$HOME/psi4/objdir/stage/lib:$HOME/bin/ambit/lib:$PYTHONPATH:$HOME/work/forte/forte
export AMBITPATH=$HOME/bin/ambit
export PATH=$PATH:$HOME/psi4/objdir/stage/bin
export OPENBLAS_NUM_THREADS=1
lscpu
export CPUTYPE=$(lscpu | grep 'Vendor ID' | awk '{print $3}')
echo $CPUTYPE
if [ "$CPUTYPE" = "AuthenticAMD" ]; then
echo "int mkl_serv_intel_cpu_true() { return 1; }" > fixcpu.c
gcc -shared -fPIC -o libfixcpu.so fixcpu.c
fi
export CPUTYPE=$(lscpu | grep 'Vendor ID' | awk '{print $3}')
if [ "$CPUTYPE" = "AuthenticAMD" ]; then
export LD_PRELOAD=$PWD/libfixcpu.so
fi
cd $HOME/work/forte/forte/tests/pytest-block2
pytest -v
- name: Upload artifacts
if: failure()
uses: actions/upload-artifact@v4
with:
name: forte-test-outputs
path: |
~/work/forte/forte/tests/methods/*/output.dat
~/work/forte/forte/tests/methods/*/output.log
~/work/forte/forte/tests/pytest*/output.dat
~/work/forte/forte/tests/pytest*/output.log