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properly calculate time #332

properly calculate time

properly calculate time #332

Workflow file for this run

# This is a GitHub actions workflow for WW3.
#
# This workflow builds with the Intel compilers.
#
# Matt Masarik, Alex Richert, Ed Hartnett
name: Intel Linux Build
on: [push, pull_request, workflow_dispatch]
# Cancel in-progress workflows when pushing to a branch
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
# Set I_MPI_CC/F90 so Intel MPI wrapper uses icc/ifort instead of gcc/gfortran
env:
cache_key: intel10-3
CC: icc
FC: ifort
CXX: icpc
I_MPI_CC: icc
I_MPI_F90: ifort
# Split into a dependency build step, and a WW3 build step which
# builds multiple switches in a matrix. The setup is run once and
# the environment is cached so each build of WW3 can share the dependencies.
jobs:
setup:
runs-on: ubuntu-latest
steps:
- name: checkout-ww3
if: steps.cache-env.outputs.cache-hit != 'true'
uses: actions/checkout@v3
with:
path: ww3
# Cache spack, OASIS, and compiler
# No way to flush Action cache, so key may have # appended
- name: cache-env
id: cache-env
uses: actions/cache@v3
with:
path: |
spack
~/.spack
work_oasis3-mct
/opt/intel
key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_intel.yaml') }}
- name: install-intel-compilers
if: steps.cache-env.outputs.cache-hit != 'true'
run: |
wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
echo "deb https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
sudo apt-get update
sudo apt-get install intel-oneapi-dev-utilities intel-oneapi-mpi-devel intel-oneapi-compiler-fortran-2023.2.1 intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic-2023.2.1 intel-oneapi-openmp
# Build WW3 spack environment
- name: install-dependencies-with-spack
if: steps.cache-env.outputs.cache-hit != 'true'
run: |
sudo mv /usr/local /usr/local_mv
# Install NetCDF, ESMF, g2, etc using Spack
. /opt/intel/oneapi/setvars.sh
git clone -c feature.manyFiles=true https://github.com/JCSDA/spack.git
source spack/share/spack/setup-env.sh
ln -s $(realpath $(which gcc)) spack/lib/spack/env/intel/gcc # spack/make bug in ESMF
spack env create ww3-intel ww3/model/ci/spack_intel.yaml
spack env activate ww3-intel
spack compiler find
sudo apt install cmake
spack external find
spack config add "packages:mpi:require:'intel-oneapi-mpi'"
spack config add "packages:all:require:['%intel']"
spack concretize
spack install --dirty -v --fail-fast
spack clean --all
- name: build-oasis
if: steps.cache-env.outputs.cache-hit != 'true'
run: |
. /opt/intel/oneapi/setvars.sh
source spack/share/spack/setup-env.sh
spack env activate ww3-intel
export WWATCH3_DIR=${GITHUB_WORKSPACE}/ww3/model
export OASIS_INPUT_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/oasis3-mct
export OASIS_WORK_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct
cd ww3/regtests/ww3_tp2.14/input/oasis3-mct/util/make_dir
cmake .
make
cp -r ${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct ${GITHUB_WORKSPACE}
build:
needs: setup
strategy:
matrix:
switch: [Ifremer1, NCEP_st2, NCEP_st4, ite_pdlib, NCEP_st4sbs, NCEP_glwu, OASACM, UKMO, MULTI_ESMF]
runs-on: ubuntu-latest
steps:
- name: checkout-ww3
uses: actions/checkout@v3
with:
path: ww3
- name: cache-env
id: cache-env
uses: actions/cache@v3
with:
path: |
spack
~/.spack
work_oasis3-mct
/opt/intel
key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_intel.yaml') }}
- name: build-ww3
run: |
sudo mv /usr/local /usr/local_mv
sudo apt install cmake
. /opt/intel/oneapi/setvars.sh
source spack/share/spack/setup-env.sh
spack env activate ww3-intel
cd ww3
export CC=mpiicc
export FC=mpiifort
export OASISDIR=${GITHUB_WORKSPACE}/work_oasis3-mct
mkdir build && cd build
if [[ ${{ matrix.switch }} == "MULTI_ESMF" ]]; then
cmake .. -DMULTI_ESMF=ON -DSWITCH=multi_esmf
else
cmake .. -DSWITCH=${{ matrix.switch }}
fi
make -j2 VERBOSE=1