update to have regtests pass #12
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name: regtest_gnu | ||
on: [push, pull_request, workflow_dispatch] | ||
# Cancel in-progress workflows when pushing to a branch | ||
concurrency: | ||
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | ||
cancel-in-progress: true | ||
env: | ||
cache_key: gnu11-1 | ||
CC: gcc-10 | ||
FC: gfortran-10 | ||
CXX: g++-10 | ||
# Split into a steup step, and a WW3 build step which | ||
# builds multiple switches in a matrix. The setup is run once and | ||
# the environment is cached so each build of WW3 can share the dependencies. | ||
jobs: | ||
setup: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- name: checkout-ww3 | ||
if: steps.cache-env.outputs.cache-hit != 'true' | ||
uses: actions/checkout@v3 | ||
with: | ||
path: ww3 | ||
# Cache spack, OASIS, and compiler | ||
# No way to flush Action cache, so key may have # appended | ||
- name: cache-env | ||
id: cache-env | ||
uses: actions/cache@v3 | ||
with: | ||
path: | | ||
spack | ||
~/.spack | ||
work_oasis3-mct | ||
key: spack-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_gnu.yaml') }} | ||
# Build WW3 spack environment | ||
- name: install-dependencies-with-spack | ||
if: steps.cache-env.outputs.cache-hit != 'true' | ||
run: | | ||
# Install NetCDF, ESMF, g2, etc using Spack | ||
sudo apt install cmake | ||
git clone -c feature.manyFiles=true https://github.com/JCSDA/spack.git | ||
source spack/share/spack/setup-env.sh | ||
spack env create ww3-gnu ww3/model/ci/spack_gnu.yaml | ||
spack env activate ww3-gnu | ||
spack compiler find | ||
spack external find cmake | ||
spack add [email protected] | ||
spack concretize | ||
spack install --dirty -v | ||
- name: build-oasis | ||
if: steps.cache-env.outputs.cache-hit != 'true' | ||
run: | | ||
source spack/share/spack/setup-env.sh | ||
spack env activate ww3-gnu | ||
export WWATCH3_DIR=${GITHUB_WORKSPACE}/ww3/model | ||
export OASIS_INPUT_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/oasis3-mct | ||
export OASIS_WORK_PATH=${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct | ||
cd ww3/regtests/ww3_tp2.14/input/oasis3-mct/util/make_dir | ||
cmake . | ||
make VERBOSE=1 | ||
cp -r ${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.14/input/work_oasis3-mct ${GITHUB_WORKSPACE} | ||
regtest_gnu: | ||
needs: setup | ||
runs-on: ubuntu-latest | ||
steps: | ||
- name: install-dependencies | ||
run: | | ||
sudo apt-get update | ||
sudo apt-get install doxygen gcovr valgrind | ||
- name: checkout-ww3 | ||
uses: actions/checkout@v3 | ||
with: | ||
path: ww3 | ||
- name: cache-env | ||
id: cache-env | ||
uses: actions/cache@v3 | ||
with: | ||
path: | | ||
spack | ||
~/.spack | ||
work_oasis3-mct | ||
key: spack2-${{ runner.os }}-${{ env.cache_key }}-${{ hashFiles('ww3/model/ci/spack_gnu.yaml') }} | ||
- name: build-ww3 | ||
run: | | ||
source spack/share/spack/setup-env.sh | ||
spack env activate ww3-gnu | ||
set -x | ||
cd ww3 | ||
export CC=mpicc | ||
export FC=mpif90 | ||
export OASISDIR=${GITHUB_WORKSPACE}/work_oasis3-mct | ||
# mkdir build && cd build | ||
export LD_LIBRARY_PATH="/home/runner/work/WW3/WW3/spack/var/spack/environments/ww3-gnu/.spack-env/view/:$LD_LIBRARY_PATH" | ||
# cmake -DSWITCH=${GITHUB_WORKSPACE}/ww3/regtests/unittests/data/switch.io -DCMAKE_BUILD_TYPE=Debug .. | ||
# make -j2 VERBOSE=1 | ||
cd ${GITHUB_WORKSPACE}/ww3 | ||
ls -l | ||
${GITHUB_WORKSPACE}/ww3/model/bin/ww3_from_ftp.sh -k | ||
cd regtests | ||
./bin/run_cmake_test -o all -S -T -s PR1_MPI -w work_PR1_MPI -f -p mpirun -n 24 ../model ww3_tp2.5 | ||
cd ww3_tp2.5 | ||
ls -l | ||
cd work_PR1_MPI | ||
pwd | ||
ls -l | ||
ncdump -h out_pnt.ww3.nc > ncdump_out.txt | ||
cat ncdump_out.txt | ||
pwd | ||
cat ${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.5/out_pnt_ncdump.txt | ||
cmp ${GITHUB_WORKSPACE}/ww3/regtests/ww3_tp2.5/out_pnt_ncdump.txt ncdump_out.txt | ||
- name: cache-data | ||
id: cache-data | ||
uses: actions/cache@v3 | ||
with: | ||
path: ww3/ww3_from_ftp.v7.14.1.tar.gz | ||
key: ww3_from_ftp.v7.14.1 | ||