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fixed dep

fixed dep #5

Workflow file for this run

name: Python CI
on:
push:
branches: [ main ]
# When this workflow is queued, automatically cancel any previous running
# or pending jobs from the same branch
concurrency:
group: conda-${{ github.ref }}
cancel-in-progress: true
# Required shell entrypoint to have properly activated conda environments
defaults:
run:
shell: bash -l {0}
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.10"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: conda-incubator/[email protected]
with:
miniforge-version: latest
use-mamba: true
python-version: ${{ matrix.python-version }}
channel-priority: strict
environment-file: environment.yml
- name: Review dependencies
run: |
which python
pip list
mamba list
- name: Test with pytest
run: |
python -m pytest --cov=zarrcade --cov-report=html --cov-report=term -W ignore::DeprecationWarning --html=htmlcov/test_results.html
- name: Upload pytest and coverage results
uses: actions/upload-artifact@v4
if: always()
with:
name: testcoverage-${{ matrix.os }}-py${{ matrix.python-version }}
path: |
htmlcov/*