Merge pull request #171 from Janelia-Trackathon-2023/unit_tests #55

	name: Benchmark

	# Do not run this workflow on pull request since this workflow has permission to modify contents.
	on:
	push:
	branches:
	- main

	permissions:
	# deployments permission to deploy GitHub pages website
	deployments: write
	# contents permission to update benchmark contents in gh-pages branch
	contents: write

	jobs:
	benchmark:
	name: Report benchmarks on gh-pages
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4

	- name: Retrieve cached data
	uses: actions/cache/restore@v4
	id: cache_data
	with:
	path: downloads
	key: ${{ hashFiles('scripts/download_test_data.py') }}

	- name: Download Samples
	if: steps.cache_data.outputs.cache-hit != 'true'
	run: \|
	pip install requests
	python scripts/download_test_data.py

	- name: Cache sample data
	uses: actions/cache/save@v4
	if: steps.cache_data.outputs.cache-hit != 'true'
	with:
	path: downloads
	key: ${{ hashFiles('scripts/download_test_data.py') }}

	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: 3.11
	cache-dependency-path: "pyproject.toml"
	cache: "pip"

	- name: Install dependencies
	run: \|
	python -m pip install -U pip
	python -m pip install -e .[test]

	- name: Run benchmark
	run: \|
	pytest tests/bench.py --benchmark-json output.json

	- name: Store benchmark results
	uses: benchmark-action/github-action-benchmark@v1
	with:
	name: Python Benchmark with pytest-benchmark
	tool: 'pytest'
	output-file-path: output.json
	github-token: ${{ secrets.GITHUB_TOKEN }}
	auto-push: true

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