Additional starter scenarios

README.md

@@ -16,23 +16,26 @@
   - runs the model
   - plots SEIR trajectories for a node
   - plots a trajectory of %I vs. %S over time
+- note: the first time you run a cell in a Jupyter notebook in a Codespace, you will get some questions from VSCode in the command bar at the top of the window -
+  - "Select Kernel" → "Install/Enable suggested extensions Python + Jupyter"
+  - "Select Another Kernel" &rarr; "Python Environment" &rarr; "Python 3.10.13 ~/python/current/bin/python3" <br> (the version on the last one may change over time)
 
 ----
 
 ## Schedule
 
 ### First 30 Days (EOY 2023)
 
-- <strike>firm up team/stakeholders/advisory committee</strike>
+- <strike>firm up team/stakeholders/advisory committee</strike> ✅
 - enumerate necessary features for reproducing/supporting previous and in-progress modeling efforts
-  - <strike>measles (kmccarthy)</strike>
+  - <strike>measles (kmccarthy)</strike> ✅
   - malaria (cbever/pselvaraj)
-  - <strike>end-game/end-stage polio</strike>
-- <strike>enumerate necessary features for outstanding questions and issues</strike>
+  - <strike>end-game/end-stage polio</strike> ✅
+- <strike>enumerate necessary features for outstanding questions and issues</strike> ✅
 
 ### First 60 Days (January 31, 2024)
 
-- <strike>"paper search" / investigate potential existing solutions</strike>
+- <strike>"paper search" / investigate potential existing solutions</strike> ✅
 - capture development requirements
   - tools for preparing data (demographics, networks, etc.)
   - file formats
@@ -58,7 +61,7 @@
 
 ### First 120 Days (February 29, 2024)
 
-- <strike>technical considerations</strike>
+- <strike>technical considerations</strike> ✅
   - <strike>single laptop</strike>
   - <strike>single laptop w/Nvidia GPU</strike>
   - <strike>multicore</strike>

src/idmlaser/utils.py

@@ -320,3 +320,19 @@ def predicted_day_of_death(age_days, max_year=100):
     dod = yod * 365 + doy
 
     return dod
+
+class GrabBag:
+    def __init__(self, *bags):
+        for bag in bags:
+            assert isinstance(bag, (type(self), dict))
+            for key, value in (bag.__dict__ if isinstance(bag, type(self)) else bag).items():
+                setattr(self, key, value)
+
+    def __add__(self, other):
+        return GrabBag(self, other)
+
+    def __iadd__(self, other):
+        assert isinstance(other, (type(self), dict))
+        for key, value in (other.__dict__ if isinstance(other, type(self)) else other).items():
+            setattr(self, key, value)
+        return self