4SZ2 reproduction #334

	## Disclaimer - This GitHub Actions workflow runs all the changed tests for the project.

	# Name the workflow
	name: test_changes

	# Define when it runs
	on:
	pull_request:
	paths:
	- 'tests/*/test_.py'

	# Jobs that define the workflow
	jobs:

	# A job to list the tests to be run
	identify-tests:
	runs-on: ubuntu-latest
	outputs:
	tests: ${{ steps.identify.outputs.tests }}
	steps:
	- name: Checkout main branch for comparison
	uses: actions/checkout@v3
	with:
	fetch-depth: 0

	- name: Create a list of tests for changed tests
	id: identify
	run: \|
	# Loop through modified files between PR base and last head
	for file in $(git diff --name-only --diff-filter=d remotes/origin/main...$GITHUB_SHA)
	do
	# List files corresponding to tests//test_.py
	if [[ "$file" =~ ."tests"."test_".*".py" ]]; then
	test_files="$test_files $file"
	fi
	done
	# Send the test list as step output
	echo $test_files
	echo "tests=$test_files" >> $GITHUB_OUTPUT

	# A job to run the tests
	pytest:
	needs: identify-tests
	runs-on: self-hosted
	timeout-minutes: 2880 # 48h
	steps:
	- name: Checkout PR branch
	uses: actions/checkout@v3

	- name: Load configuration for self-hosted runner
	run: cp /home/neuro/local_testing_config.toml narps_open/utils/configuration/testing_config.toml

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install .[tests]

	- name: Execute tests with pytest
	run: \|
	if [[ "${{ needs.identify-tests.outputs.tests }}" != "" ]]; then
	pytest -s -q ${{ needs.identify-tests.outputs.tests }} -m "not pipeline_test"
	fi

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