Merge pull request #50 from ImperialCollegeLondon/upload_dafni

Add publish to DAFNI

.github/workflows/publish.yml

@@ -66,3 +66,30 @@ jobs:
 
  - name: Publish package distributions to PyPI
  uses: pypa/gh-action-pypi-publish@release/v1
+
+ publish-DAFNI:
+ needs: publish-PyPI
+ name: Publish WSIMOD to DAFNI
+ runs-on: ubuntu-latest
+ env:
+ VERSION: ${{ github.event.release.tag_name }}
+ DAFNI_USERNAME: ${{ secrets.DAFNI_USERNAME }}
+ DAFNI_PASSWORD: ${{ secrets.DAFNI_PASSWORD }}
+ PARENT_ID: ${{ vars.PARENT_ID }}
+ steps:
+ - uses: actions/checkout@v4
+ - uses: actions/setup-python@v4
+
+ - name: Create Docker image
+ run: |
+ docker build -t wsimod:$VERSION .
+ docker save -o wsimod-$VERSION.tar.gz wsimod:$VERSION
+
+ - name: Install DAFNI API
+ run: python -m pip install dafni-cli
+
+ - name: Log in to DAFNI
+ run: dafni login
+
+ - name: Upload updated model
+ run: dafni upload model model_file.yaml wsimod-$VERSION.tar.gz --parent-id $PARENT_ID -m "v$VERSION, see release notes."