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NeuriteNet

NeuriteNet is a machine learning platform developed to identify differences in control and experimental groups of cultured neurons based on morphological criteria

This repository has the python code for training and running the NeuriteNet model as well as additional tools for deep learning interpretability. For more details, please check the bioRxiv pre-print: DOI:10.1101/2021.03.31.437885

Model Requirements

  • TensorFlow 2.0+
  • tqdm

XRAI Saliency Requirements

  • NumPy
  • OpenCV
  • Scikit-Image
  • tqdm

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