0.0.3

IbrahimTanyalcin · Aug 27, 2021 · 2471cb5 · 2471cb5
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -0,0 +1,7 @@
+# CHANGELOG
+
+## NPM_0.0.3 / IPV_1.47
+- updated version string in `SNPtoAA.pl`
+- version number is removed from `package.json`'s main entry point. Regarless of versions, entry point will be same (`SNPtoAA.pl`).
+- Removed extra copies of ACE2 and Sars-Cov-2 spike examples
+- Added `FindBin` module from `relativePathPropositon` branch to remedy potential issues with relative paths in different OSs
diff --git a/README.md b/README.md
@@ -4,7 +4,7 @@
 
 ## Read the article
 
-[![link](https://github.com/IbrahimTanyalcin/I-PV/blob/master/img/i-pv_article.jpeg)](https://academic.oup.com/bioinformatics/article/32/3/447/1743584)
+[![link](https://github.com/IbrahimTanyalcin/I-PV/blob/master/img/i-pv_article.jpeg?raw=true)](https://academic.oup.com/bioinformatics/article/32/3/447/1743584)
 
 ## Interactive Protein Sequence VIsualization/Viewer
 
@@ -24,4 +24,16 @@ Below are some [sample outputs](http://i-pv.org/EGFR.html).
 
 ![alt tag](https://github.com/IbrahimTanyalcin/I-PV/blob/master/img/sample.png?raw=true)
 
-![alt tag 2](https://github.com/IbrahimTanyalcin/I-PV/blob/master/img/sample2.png?raw=true)
+![alt tag 2](https://github.com/IbrahimTanyalcin/I-PV/blob/master/img/sample2.png?raw=true)
+
+## Publishing
+
+- Run one of the publish scripts within `package.json`:
+
+```
+npm run publishPatchNPM
+```
+- The `gitTag.js` inside `/utils` can both update `npm` version and `org_ipv` version. 
+- If you change peripheral files only, increment `npm` version. 
+- If you change `SNPtoAA.pl`, increment both `npm` version and `org_ipv` version.
+- Choose the right publish script based on above.
diff --git a/i-pv/circos-p/Output/ace2/ACE2.html b/i-pv/circos-p/Output/ace2/ACE2.html
diff --git a/i-pv/circos-p/Output/ace2/ACE2_2.html b/i-pv/circos-p/Output/ace2/ACE2_2.html
diff --git a/i-pv/circos-p/Output/ace2/ACE2_or.html b/i-pv/circos-p/Output/ace2/ACE2_or.html
diff --git a/i-pv/circos-p/Output/covid19/COVID.html b/i-pv/circos-p/Output/covid19/COVID.html
diff --git a/i-pv/circos-p/Output/covid19/COVID_2.html b/i-pv/circos-p/Output/covid19/COVID_2.html
diff --git a/i-pv/circos-p/Output/covid19/COVID_or - Copy.html b/i-pv/circos-p/Output/covid19/COVID_or - Copy.html
diff --git a/i-pv/script/SNPtoAA.pl b/i-pv/script/SNPtoAA.pl
@@ -13,7 +13,7 @@
 my $version;
 getopt();
 defined $help ? print $explanation : print "" ;
-defined $version ? print "version 1.46\n" : print "" ;
+defined $version ? print "version 1.47\n" : print "" ;
 
 
 if ((defined $PATH)&&($PATH =~ /^.*\/.*\s*|^-.*\/.*\s*/)) {

diff --git a/package-lock.json b/package-lock.json
diff --git a/package.json b/package.json
@@ -1,6 +1,6 @@
 {
   "name": "ibowankenobi-i-pv",
-  "version": "0.0.2",
+  "version": "0.0.3",
   "org_ipv": {
     "version": "1.47"
   },