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fix: replace ragoo with ragtag #2749

fix: replace ragoo with ragtag

fix: replace ragoo with ragtag #2749

Triggered via pull request July 24, 2024 12:56
Status Failure
Total duration 1h 26m 5s
Artifacts 3

main.yml

on: pull_request
Cancel-previous-jobs
3s
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Matrix: Benchmarks-Tests
Matrix: Technology-Tests
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15 errors and 6 warnings
Benchmarks-Tests (benchmark_assembly)
The job was canceled because "benchmark_non_sars_cov_2" failed.
Benchmarks-Tests (benchmark_assembly)
The operation was canceled.
Benchmarks-Tests (benchmark_mixtures)
The job was canceled because "benchmark_non_sars_cov_2" failed.
Benchmarks-Tests (benchmark_mixtures)
The operation was canceled.
Benchmarks-Tests (compare_assemblers)
The job was canceled because "benchmark_non_sars_cov_2" failed.
Benchmarks-Tests (compare_assemblers)
The operation was canceled.
Benchmarks-Tests (benchmark_strain_calling)
The job was canceled because "benchmark_non_sars_cov_2" failed.
Benchmarks-Tests (benchmark_strain_calling)
The operation was canceled.
Benchmarks-Tests (benchmark_reads)
The job was canceled because "benchmark_non_sars_cov_2" failed.
Benchmarks-Tests (benchmark_reads)
The operation was canceled.
Technology-Tests (all, all, amplicon)
Failed to CreateArtifact: Received non-retryable error: Failed request: (409) Conflict: an artifact with this name already exists on the workflow run
Technology-Tests (all, ont, amplicon)
The job was canceled because "all_all_amplicon" failed.
Technology-Tests (all, ont, amplicon)
The operation was canceled.
Technology-Tests (all, ion, amplicon)
The job was canceled because "all_all_amplicon" failed.
Technology-Tests (all, ion, amplicon)
The operation was canceled.
Cancel-previous-jobs
The following actions uses node12 which is deprecated and will be forced to run on node16: khan/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Cancel-previous-jobs
The following actions uses Node.js version which is deprecated and will be forced to run on node20: khan/[email protected]. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Technology-Tests (all -np, all, shotgun)
No files were found with the provided path: .tests/logs/. No artifacts will be uploaded.
Technology-Tests (all -np, all, shotgun)
No files were found with the provided path: .tests/results/patient-reports/2022-01-01.zip. No artifacts will be uploaded.
Technology-Tests (all -np, all, amplicon)
No files were found with the provided path: .tests/results/patient-reports/2022-01-01.zip. No artifacts will be uploaded.
Technology-Tests (all -np, all, amplicon)
No files were found with the provided path: .tests/logs/. No artifacts will be uploaded.

Artifacts

Produced during runtime
Name Size
log-rule-all-technology-all Expired
354 KB
report-rule-all-all-amplicon Expired
41.6 MB
report-rule-all-all-shotgun Expired
40.5 MB