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updated script
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junjun-zhang committed Feb 9, 2021
1 parent 9208895 commit fa36d95
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1 change: 1 addition & 0 deletions fastqc-wf/fastqc-wf.nf
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Expand Up @@ -12,6 +12,7 @@ params.publish_dir = "" // set to empty string will disable publishDir
// tool specific parmas go here, add / change as needed
params.input_file = ""
params.output_pattern = "*.html" // fastqc output html report
params.new_param = ""

include { fastqc } from "./wfpr_modules/github.com/icgc-tcga-pancancer/awesome-wfpkgs1/[email protected]/fastqc"
include { cleanupWorkdir } from "./wfpr_modules/github.com/icgc-argo/demo-wfpkgs/[email protected]/main"
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