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added GET- A foundation model of transcription across human cell types #9

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added GET- A foundation model of transcription across human cell types #9

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37921a6
added GET- A foundation model of transcription across human cell types
dalloliogm Jan 10, 2025
95c7077
added CpGPT
dalloliogm Jan 10, 2025
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3 changes: 3 additions & 0 deletions README.md
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Expand Up @@ -319,6 +319,9 @@ In this survey, we focus on scientific languages (i.e., textual, molecular, prot
- `2023.08` DNAGPT: A Generalized Pre-trained Tool for Versatile DNA Sequence Analysis Tasks [bioRxiv](https://www.bioRxiv.org/content/10.1101/2023.07.11.548628v2)
- `2024.02` Evo: Sequence modeling and design from molecular to genome scale with Evo [Nature](https://www.nature.com/articles/s41586-023-06139-9)
- `2024.02` GenomicLLM: Exploring Genomic Large Language Models: Bridging the Gap between Natural Language and Gene Sequences [BioRxiv](https://www.biorxiv.org/content/10.1101/2024.02.26.581496v1)
- `2024.10` CpGPT: a Foundation Model for DNA Methylation [BioRxiv](https://www.biorxiv.org/content/10.1101/2024.10.24.619766v1)
- `2025-01` GET (general expression transformer): A foundation model of transcription across human cell types. [Nature](https://www.nature.com/articles/s41586-024-08391-z)


### Function Prediction

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