Checks HDF5 build features (cmake)

.github/workflows/linux.yml

@@ -14,7 +14,7 @@ on:
  # Allows to run this workflow manually from the Actions tab
  workflow_dispatch:
 jobs:
- vol-async-hdf5-1_14_3-Makefile:
+ vol-async-hdf5-latest-Makefile:
  runs-on: ubuntu-latest
  timeout-minutes: 60
 
@@ -23,18 +23,17 @@ jobs:
  uses: actions/checkout@v3
  with:
  submodules: 'true'
-
- - name: Checkout HDF5 1.14.3
- uses: actions/checkout@v3
- with:
- repository: HDFGroup/hdf5
- ref: hdf5-1_14_3
- path: hdf5
 
  - name: Dependencies
  run: |
  sudo apt-get update
  sudo apt-get install libtool libopenmpi-dev zlib1g-dev python3
+
+ - name: Checkout latest HDF5 release
+ run: |
+ wget https://github.com/HDFGroup/hdf5/releases/latest/download/hdf5.tar.gz
+ tar xzf hdf5.tar.gz
+ ln -sf hdf5-* hdf5
 
  - name: Installation
  run: |
@@ -46,10 +45,8 @@ jobs:
  mkdir $HDF5_DIR
  # Compile HDF5
  cd hdf5
- export HDF5_LIBTOOL=/usr/bin/libtoolize
- ./autogen.sh
  ./configure --prefix=$HDF5_DIR --enable-parallel --enable-threadsafe --enable-unsupported \
- --disable-tests --disable-hl --disable-fortran --disable-tools --disable-hltools
+ --disable-tests --disable-hl --disable-fortran --disable-tools
  make && make install
 
  # Compile Argobots
@@ -138,7 +135,7 @@ jobs:
  export HDF5_LIBTOOL=/usr/bin/libtoolize
  ./autogen.sh
  ./configure --prefix=$HDF5_DIR --enable-parallel --enable-threadsafe --enable-unsupported \
- --disable-tests --disable-hl --disable-fortran --disable-tools --disable-hltools
+ --disable-tests --disable-hl --disable-fortran --disable-tools
  make && make install
 
  # Compile Argobots
@@ -193,7 +190,7 @@ jobs:
  make check
  date
 
- vol-async-hdf5-1_14_3-cmake:
+ vol-async-hdf5-latest-cmake:
  runs-on: ubuntu-latest
  timeout-minutes: 30
 
@@ -202,19 +199,18 @@ jobs:
  uses: actions/checkout@v3
  with:
  submodules: 'true'
-
- - name: Checkout HDF5 1.14.3
- uses: actions/checkout@v3
- with:
- repository: HDFGroup/hdf5
- ref: hdf5-1_14_3
- path: hdf5
-
+
  - name: Dependencies
  run: |
  sudo apt-get update
  sudo apt-get install libtool libopenmpi-dev zlib1g-dev python3 cmake
-
+
+ - name: Checkout latest HDF5 release
+ run: |
+ wget https://github.com/HDFGroup/hdf5/releases/latest/download/hdf5.tar.gz
+ tar xzf hdf5.tar.gz
+ ln -sf hdf5-* hdf5
+
  - name: Installation
  run: |
  mydir="$PWD"
@@ -228,7 +224,7 @@ jobs:
  mkdir build
  cd build
  cmake -DCMAKE_INSTALL_PREFIX=$HDF5_DIR -DHDF5_ENABLE_PARALLEL=ON -DHDF5_ENABLE_THREADSAFE=ON \
- -DALLOW_UNSUPPORTED=ON -DBUILD_TESTING=OFF -DHDF5_BUILD_HL_LIB=OFF -DHDF5_BUILD_HL_TOOLS=OFF \
+ -DALLOW_UNSUPPORTED=ON -DBUILD_TESTING=OFF -DHDF5_BUILD_HL_LIB=OFF \
  -DHDF5_BUILD_EXAMPLES=OFF -DHDF5_BUILD_FORTRAN=OFF -DCMAKE_C_COMPILER=mpicc ..
  make -j && make install
 
@@ -309,7 +305,7 @@ jobs:
  mkdir build
  cd build
  cmake -DCMAKE_INSTALL_PREFIX=$HDF5_DIR -DHDF5_ENABLE_PARALLEL=ON -DHDF5_ENABLE_THREADSAFE=ON \
- -DALLOW_UNSUPPORTED=ON -DBUILD_TESTING=OFF -DHDF5_BUILD_HL_LIB=OFF -DHDF5_BUILD_HL_TOOLS=OFF \
+ -DALLOW_UNSUPPORTED=ON -DBUILD_TESTING=OFF -DHDF5_BUILD_HL_LIB=OFF \
  -DHDF5_BUILD_EXAMPLES=OFF -DHDF5_BUILD_FORTRAN=OFF -DCMAKE_C_COMPILER=mpicc ..
  make -j && make install
 

CMakeLists.txt

@@ -32,11 +32,30 @@ if(NOT HDF5_VOL_ASYNC_INSTALL_TEST_DIR)
  set(HDF5_VOL_ASYNC_INSTALL_TEST_DIR ${CMAKE_INSTALL_PREFIX}/test)
 endif()
 
+include(CheckSymbolExists)
+list(APPEND CMAKE_REQUIRED_INCLUDES ${HDF5_INCLUDE_DIRS})
+check_symbol_exists(H5_HAVE_PARALLEL "H5pubconf.h" HDF5_HAVE_PARALLEL)
+if(NOT HDF5_HAVE_PARALLEL)
+ message(FATAL_ERROR "HDF5 library needs to enable parallel support.")
+endif()
+
+check_symbol_exists(H5_HAVE_THREADSAFE "H5pubconf.h" HDF5_HAVE_THREADSAFE)
+if(NOT HDF5_HAVE_THREADSAFE)
+ message(FATAL_ERROR "HDF5 library needs to enable threadsafe support.")
+endif()
+
+# Check if HDF5 version is 1.14 or greater
+if(HDF5_FOUND)
+ if (HDF5_VERSION VERSION_LESS "1.14.0")
+ message (FATAL_ERROR "HDF5 ${HDF5_VERSION}: required HDF5 version is at least 1.14 ")
+ endif ()
+endif ()
+
 set(HDF5_VOL_ASYNC_PACKAGE "hdf5_vol_async")
 set(HDF5_VOL_ASYNC_PACKAGE_NAME "HDF5_VOL_ASYNC")
 set(HDF5_VOL_ASYNC_PACKAGE_DESCRIPTION "HDF5 Asynchronous I/O VOL connector")
-set(HDF5_VOL_ASYNC_PACKAGE_URL "https://github.com/hpc-io/vol-async")
-set(HDF5_VOL_ASYNC_PACKAGE_VENDOR "HPC IO")
+set(HDF5_VOL_ASYNC_PACKAGE_URL "https://github.com/HDFGroup/vol-async")
+set(HDF5_VOL_ASYNC_PACKAGE_VENDOR "HDF Group")
 
 #-----------------------------------------------------------------------------
 # Options

README.md

@@ -1,4 +1,4 @@
-[![linux](https://github.com/hpc-io/vol-async/actions/workflows/linux.yml/badge.svg?branch=develop)](https://github.com/hpc-io/vol-async/actions/workflows/linux.yml)
+[![linux](https://github.com/HDFGroup/vol-async/actions/workflows/linux.yml/badge.svg?branch=develop)](https://github.com/HDFGroup/vol-async/actions/workflows/linux.yml)
 # HDF5 Asynchronous I/O VOL Connector
 
 Asynchronous I/O is becoming increasingly popular with the large amount of data access required by scientific applications. They can take advantage of an asynchronous interface by scheduling I/O as early as possible and overlap computation or communication with I/O operations, which hides the cost associated with I/O and improves the overall performance. This work is part of the [ECP-ExaIO](https://www.exascaleproject.org/research-project/exaio) project.

docs/source/gettingstarted.rst

@@ -32,7 +32,7 @@ Define the following configuration parameters, which may be used in the instruct
 
 .. code-block::
 
- git clone --recursive https://github.com/hpc-io/vol-async.git
+ git clone --recursive https://github.com/HDFGroup/vol-async.git
 
 2. Download the HDF5 source code