Sync develop changes October 1 - 8 to hdf5_1_14

.github/workflows/clang-format-check.yml

@@ -18,6 +18,6 @@ jobs:
  with:
  source: '.'
  extensions: 'c,h,cpp,hpp,java'
- clangFormatVersion: 13
+ clangFormatVersion: 17
  style: file
  exclude: './config ./hl/src/H5LTanalyze.c ./hl/src/H5LTparse.c ./hl/src/H5LTparse.h ./src/H5Epubgen.h ./src/H5Einit.h ./src/H5Eterm.h ./src/H5Edefin.h ./src/H5version.h ./src/H5overflow.h'

.github/workflows/clang-format-fix.yml

@@ -30,7 +30,7 @@ jobs:
  with:
  source: '.'
  extensions: 'c,h,cpp,hpp,java'
- clangFormatVersion: 13
+ clangFormatVersion: 17
  inplace: True
  style: file
  exclude: './config ./hl/src/H5LTanalyze.c ./hl/src/H5LTparse.c ./hl/src/H5LTparse.h ./src/H5Epubgen.h ./src/H5Einit.h ./src/H5Eterm.h ./src/H5Edefin.h ./src/H5version.h ./src/H5overflow.h'

.github/workflows/cmake-script.yml

@@ -111,7 +111,7 @@ jobs:
  - name: Run ctest script (Windows)
  run: |
  cd "${{ runner.workspace }}/hdf5"
- ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH,LOCAL_SUBMIT=ON,BUILD_GENERATOR=VS202264,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=VS202264,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
  shell: bash
  continue-on-error: true
 
@@ -200,7 +200,7 @@ jobs:
  - name: Run ctest (Linux)
  run: |
  cd "${{ runner.workspace }}/hdf5"
- ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-GCC,LOCAL_SUBMIT=ON,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-GCC,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
  shell: bash
  continue-on-error: true
 
@@ -302,7 +302,7 @@ jobs:
  id: run-ctest
  run: |
  cd "${{ runner.workspace }}/hdf5"
- ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Clang,LOCAL_SUBMIT=ON,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Clang,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
  shell: bash
  continue-on-error: true
 
@@ -387,7 +387,7 @@ jobs:
  - name: Run ctest (Linux S3)
  run: |
  cd "${{ runner.workspace }}/hdf5"
- ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-S3,LOCAL_SUBMIT=ON,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-S3,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
  shell: bash
  continue-on-error: true
 
@@ -495,7 +495,7 @@ jobs:
  SIGNTOOLDIR: ${{ github.workspace }}/Microsoft.Windows.SDK.BuildTools/bin/10.0.22621.0/x64
  run: |
  cd "${{ runner.workspace }}/hdf5"
- ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Intel,LOCAL_SUBMIT=ON,BUILD_GENERATOR=VS202264,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Intel,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=VS202264,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
  shell: pwsh
  continue-on-error: true
 
@@ -590,7 +590,7 @@ jobs:
  CXX: ${{ steps.setup-fortran.outputs.cxx }}
  run: |
  cd "${{ runner.workspace }}/hdf5"
- ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Intel,LOCAL_SUBMIT=ON,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Intel,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
  shell: bash
  continue-on-error: true
 
@@ -601,3 +601,201 @@ jobs:
  name: intel-ubuntu-log
  path: ${{ runner.workspace }}/hdf5/hdf5.log
  if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
+
+####### clang builds
+ build_and_test_win_clang:
+ # Windows w/ clang + CMake
+ #
+ name: "Windows ClangCL CTest"
+ runs-on: windows-latest
+ steps:
+ - name: Install Dependencies (Windows_clang)
+ run: choco install ninja
+
+ - name: add clang to env
+ uses: KyleMayes/[email protected]
+ id: setup-clang
+ with:
+ env: true
+ version: '18'
+
+ - name: Set file base name (Windows_clang)
+ id: set-file-base
+ run: |
+ FILE_NAME_BASE=$(echo "${{ inputs.file_base }}")
+ echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT
+ if [[ '${{ inputs.use_environ }}' == 'release' ]]
+ then
+ SOURCE_NAME_BASE=$(echo "${{ inputs.snap_name }}")
+ else
+ SOURCE_NAME_BASE=$(echo "hdfsrc")
+ fi
+ echo "SOURCE_BASE=$SOURCE_NAME_BASE" >> $GITHUB_OUTPUT
+ shell: bash
+
+ # Get files created by release script
+ - name: Get zip-tarball (Windows_clang)
+ uses: actions/download-artifact@fa0a91b85d4f404e444e00e005971372dc801d16 # v4.1.8
+ with:
+ name: zip-tarball
+ path: ${{ github.workspace }}
+
+ - name: using powershell
+ shell: pwsh
+ run: Get-Location
+
+ - name: List files for the space (Windows_clang)
+ run: |
+ Get-ChildItem -Path ${{ github.workspace }}
+ Get-ChildItem -Path ${{ runner.workspace }}
+ shell: pwsh
+
+ - name: Uncompress source (Windows_clang)
+ working-directory: ${{ github.workspace }}
+ run: 7z x ${{ steps.set-file-base.outputs.FILE_BASE }}.zip
+ shell: bash
+
+ - name: Copy script files for the space (Windows_clang)
+ run: |
+ Copy-Item -Path ${{ runner.workspace }}/hdf5/${{ steps.set-file-base.outputs.SOURCE_BASE }}/config/cmake/scripts/CTestScript.cmake -Destination ${{ runner.workspace }}/hdf5/
+ Copy-Item -Path ${{ runner.workspace }}/hdf5/${{ steps.set-file-base.outputs.SOURCE_BASE }}/config/cmake/scripts/HDF5config.cmake -Destination ${{ runner.workspace }}/hdf5/
+ shell: pwsh
+
+ - name: List files for the hdf5 (Windows_clang)
+ run: |
+ Get-ChildItem -Path ${{ runner.workspace }}/hdf5
+ shell: pwsh
+
+ - name: Create options file (Windows_clang)
+ uses: "DamianReeves/write-file-action@master"
+ with:
+ path: ${{ runner.workspace }}/hdf5/HDF5options.cmake
+ write-mode: overwrite
+ contents: |
+ set (CTEST_DROP_SITE_INIT "my.cdash.org")
+ # Change following line to submit to your CDash dashboard to a different CDash project
+ #set (CTEST_DROP_LOCATION_INIT "/submit.php?project=HDF5")
+ set (SITE_BUILDNAME_SUFFIX "${{ steps.set-file-base.outputs.FILE_BASE }}")
+ #set (CMAKE_GENERATOR_TOOLSET "ClangCL")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} --log-level=VERBOSE")
+ #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/clang.cmake")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_CPP_LIB:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_PLUGIN_SUPPORT:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLIBAEC_USE_LOCALCONTENT:BOOL=OFF")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_USE_LOCALCONTENT:BOOL=OFF")
+
+ - name: Run ctest (Windows_clang) with clang
+ env:
+ BINSIGN: ${{ needs.check-secret.outputs.sign-state }}
+ SIGNTOOLDIR: ${{ github.workspace }}/Microsoft.Windows.SDK.BuildTools/bin/10.0.22621.0/x64
+ run: |
+ cd "${{ runner.workspace }}/hdf5"
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Clang,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=VS202264,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ shell: pwsh
+ continue-on-error: true
+
+ # Save log files created by ctest script
+ - name: Save log (Windows_clang)
+ uses: actions/upload-artifact@v4
+ with:
+ name: clang-win-log
+ path: ${{ runner.workspace }}/hdf5/hdf5.log
+ if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`
+
+ build_and_test_linux_clang:
+ # Linux (Ubuntu) w/ clang + CMake
+ #
+ name: "Ubuntu Clang CMake"
+ runs-on: ubuntu-latest
+ steps:
+ - name: Install CMake Dependencies (Linux_clang)
+ run: |
+ sudo apt-get update
+ sudo apt-get install ninja-build doxygen graphviz curl libncurses5
+
+ - name: add clang to env
+ uses: KyleMayes/[email protected]
+ id: setup-clang
+ with:
+ env: true
+ version: '18'
+
+ - name: Set file base name (Linux_clang)
+ id: set-file-base
+ run: |
+ FILE_NAME_BASE=$(echo "${{ inputs.file_base }}")
+ echo "FILE_BASE=$FILE_NAME_BASE" >> $GITHUB_OUTPUT
+ if [[ '${{ inputs.use_environ }}' == 'release' ]]
+ then
+ SOURCE_NAME_BASE=$(echo "${{ inputs.snap_name }}")
+ else
+ SOURCE_NAME_BASE=$(echo "hdfsrc")
+ fi
+ echo "SOURCE_BASE=$SOURCE_NAME_BASE" >> $GITHUB_OUTPUT
+
+ # Get files created by release script
+ - name: Get tgz-tarball (Linux_clang)
+ uses: actions/download-artifact@fa0a91b85d4f404e444e00e005971372dc801d16 # v4.1.8
+ with:
+ name: tgz-tarball
+ path: ${{ github.workspace }}
+
+ - name: List files for the space (Linux_clang)
+ run: |
+ ls -l ${{ github.workspace }}
+ ls ${{ runner.workspace }}
+
+ - name: Uncompress source (Linux_clang)
+ run: tar -zxvf ${{ github.workspace }}/${{ steps.set-file-base.outputs.FILE_BASE }}.tar.gz
+
+ - name: Copy script files for the space (Linux_clang)
+ run: |
+ cp ${{ github.workspace }}/${{ steps.set-file-base.outputs.SOURCE_BASE }}/config/cmake/scripts/CTestScript.cmake ${{ runner.workspace }}/hdf5
+ cp ${{ github.workspace }}/${{ steps.set-file-base.outputs.SOURCE_BASE }}/config/cmake/scripts/HDF5config.cmake ${{ runner.workspace }}/hdf5
+
+ - name: List files for the hdf5 (Linux_clang)
+ run: |
+ ls ${{ runner.workspace }}/hdf5
+
+ - name: Create options file (Linux_clang)
+ uses: "DamianReeves/write-file-action@master"
+ with:
+ path: ${{ runner.workspace }}/hdf5/HDF5options.cmake
+ write-mode: overwrite
+ contents: |
+ set (CTEST_DROP_SITE_INIT "my.cdash.org")
+ # Change following line to submit to your CDash dashboard to a different CDash project
+ set (SITE_BUILDNAME_SUFFIX "${{ steps.set-file-base.outputs.FILE_BASE }}")
+ #set (CTEST_DROP_LOCATION_INIT "/submit.php?project=HDF5")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} --log-level=VERBOSE")
+ #set (CMAKE_GENERATOR_TOOLSET "clang")
+ #set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DCMAKE_TOOLCHAIN_FILE:STRING=config/toolchain/clang.cmake")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_JAVA:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_CPP_LIB:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_BUILD_FORTRAN:BOOL=OFF")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_Z_LIB_SUPPORT:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_SUPPORT:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_SZIP_ENCODING:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DHDF5_ENABLE_PLUGIN_SUPPORT:BOOL=ON")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DLIBAEC_USE_LOCALCONTENT:BOOL=OFF")
+ set (ADD_BUILD_OPTIONS "${ADD_BUILD_OPTIONS} -DZLIB_USE_LOCALCONTENT:BOOL=OFF")
+
+ - name: Run ctest (Linux_clang)
+ run: |
+ cd "${{ runner.workspace }}/hdf5"
+ ctest -S HDF5config.cmake,CTEST_SITE_EXT=GH-Clang,LOCAL_SUBMIT=ON,NINJA=TRUE,BUILD_GENERATOR=Unix,CTEST_SOURCE_NAME=${{ steps.set-file-base.outputs.SOURCE_BASE }} -C Release -VV -O hdf5.log
+ shell: bash
+ continue-on-error: true
+
+ # Save log files created by ctest script
+ - name: Save log (Linux_clang)
+ uses: actions/upload-artifact@v4
+ with:
+ name: clang-ubuntu-log
+ path: ${{ runner.workspace }}/hdf5/hdf5.log
+ if-no-files-found: error # 'warn' or 'ignore' are also available, defaults to `warn`

.github/workflows/publish-release.yml

@@ -58,3 +58,7 @@ jobs:
  run: |
  aws s3 sync ./${{ inputs.file_name }}.doxygen s3://${{ secrets.AWS_S3_BUCKET }}/${{ vars.TARGET_PATH }}/${{ inputs.target_dir }}/documentation/doxygen --delete
 
+ - name: Sync userguide to latest S3 bucket
+ run: |
+ aws s3 sync ./${{ inputs.file_name }}.doxygen s3://${{ secrets.AWS_S3_BUCKET }}/documentation/hdf5/latest --delete
+

HDF5Examples/C/H5T/h5ex_t_objref.c

@@ -124,7 +124,7 @@ main(void)
 #if H5_VERSION_GE(1, 12, 0) && !defined(H5_USE_110_API) && !defined(H5_USE_18_API) && !defined(H5_USE_16_API)
  rdata = (H5R_ref_t *)malloc(dims[0] * sizeof(H5R_ref_t));
 #else
- rdata  = (hobj_ref_t *)malloc(dims[0] * sizeof(hobj_ref_t));
+ rdata = (hobj_ref_t *)malloc(dims[0] * sizeof(hobj_ref_t));
 #endif
  /*
  * Read the data.

HDF5Examples/C/H5T/h5ex_t_objrefatt.c

@@ -136,7 +136,7 @@ main(void)
 #if H5_VERSION_GE(1, 12, 0) && !defined(H5_USE_110_API) && !defined(H5_USE_18_API) && !defined(H5_USE_16_API)
  rdata = (H5R_ref_t *)malloc(dims[0] * sizeof(H5R_ref_t));
 #else
- rdata  = (hobj_ref_t *)malloc(dims[0] * sizeof(hobj_ref_t));
+ rdata = (hobj_ref_t *)malloc(dims[0] * sizeof(hobj_ref_t));
 #endif
  /*
  * Read the data.

HDF5Examples/C/H5T/h5ex_t_regref.c

@@ -154,7 +154,7 @@ main(void)
 #if H5_VERSION_GE(1, 12, 0) && !defined(H5_USE_110_API) && !defined(H5_USE_18_API) && !defined(H5_USE_16_API)
  rdata = (H5R_ref_t *)malloc(dims[0] * sizeof(H5R_ref_t));
 #else
- rdata  = (hdset_reg_ref_t *)malloc(dims[0] * sizeof(hdset_reg_ref_t));
+ rdata = (hdset_reg_ref_t *)malloc(dims[0] * sizeof(hdset_reg_ref_t));
 #endif
 
  status = H5Sclose(space);

HDF5Examples/C/H5T/h5ex_t_regrefatt.c

@@ -169,7 +169,7 @@ main(void)
 #if H5_VERSION_GE(1, 12, 0) && !defined(H5_USE_110_API) && !defined(H5_USE_18_API) && !defined(H5_USE_16_API)
  rdata = (H5R_ref_t *)malloc(dims[0] * sizeof(H5R_ref_t));
 #else
- rdata  = (hdset_reg_ref_t *)malloc(dims[0] * sizeof(hdset_reg_ref_t));
+ rdata = (hdset_reg_ref_t *)malloc(dims[0] * sizeof(hdset_reg_ref_t));
 #endif
 
  status = H5Sclose(space);

HDF5Examples/C/TUTR/h5_extend.c

@@ -36,8 +36,8 @@ main(void)
  herr_t status;
  hsize_t chunk_dims[2] = {2, 5};
  int data[3][3] = {{1, 1, 1}, /* data to write */
- {1, 1, 1},
- {1, 1, 1}};
+  {1, 1, 1},
+  {1, 1, 1}};
 
  /* Variables used in extending and writing to the extended portion of dataset */
  hsize_t size[2];

HDF5Examples/CXX/TUTR/h5tutr_extend.cpp

@@ -33,8 +33,8 @@ main(void)
  hsize_t maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED};
  hsize_t chunk_dims[2] = {2, 5};
  int data[3][3] = {{1, 1, 1}, // data to write
- {1, 1, 1},
- {1, 1, 1}};
+  {1, 1, 1},
+  {1, 1, 1}};
 
  // Variables used in extending and writing to the extended portion of dataset
 

HDF5Examples/JAVA/H5T/H5Ex_T_Commit.java

@@ -73,7 +73,7 @@ private static class Sensor_Datatype {
 
  String[] memberNames = {"Serial number", "Location", "Temperature (F)", "Pressure (inHg)"};
  long[] memberFileTypes = {HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1,
- HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE};
+  HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE};
  static int[] memberStorage = {INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE};
 
  // Data size is the storage size for the members not the object.

HDF5Examples/JAVA/H5T/H5Ex_T_Compound.java

@@ -43,7 +43,7 @@ static class Sensor_Datatype {
 
  static String[] memberNames = {"Serial number", "Location", "Temperature (F)", "Pressure (inHg)"};
  static long[] memberMemTypes = {HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5T_C_S1,
- HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE};
+  HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE};
  static long[] memberFileTypes = {HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1,
  HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE};
  static int[] memberStorage = {INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE};

HDF5Examples/JAVA/H5T/H5Ex_T_CompoundAttribute.java

@@ -44,7 +44,7 @@ static class Sensor_Datatype {
 
  static String[] memberNames = {"Serial number", "Location", "Temperature (F)", "Pressure (inHg)"};
  static long[] memberMemTypes = {HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5T_C_S1,
- HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE};
+  HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5T_NATIVE_DOUBLE};
  static long[] memberFileTypes = {HDF5Constants.H5T_STD_I32BE, HDF5Constants.H5T_C_S1,
  HDF5Constants.H5T_IEEE_F64BE, HDF5Constants.H5T_IEEE_F64BE};
  static int[] memberStorage = {INTEGERSIZE, MAXSTRINGSIZE, DOUBLESIZE, DOUBLESIZE};

c++/src/H5DataType.cpp

@@ -91,8 +91,8 @@ DataType::DataType(const H5T_class_t type_class, size_t size)
 ///\exception H5::ReferenceException
 //--------------------------------------------------------------------------
 DataType::DataType(const H5Location &loc, const void *ref, H5R_type_t ref_type, const PropList &plist)
- : H5Object(), id{H5Location::p_dereference(loc.getId(), ref, ref_type, plist,
-   "constructor - by dereference")},
+ : H5Object(),
+ id{H5Location::p_dereference(loc.getId(), ref, ref_type, plist, "constructor - by dereference")},
  encoded_buf(NULL), buf_size(0)
 {
 }