Correct remaining 1.16 update versions (#4917)

.github/workflows/cmake-ctest.yml

@@ -157,7 +157,7 @@ jobs:
  endpoint: ${{ secrets.AZURE_ENDPOINT }}
  trusted-signing-account-name: ${{ secrets.AZURE_CODE_SIGNING_NAME }}
  certificate-profile-name: ${{ secrets.AZURE_CERT_PROFILE_NAME }}
- files-folder: ${{ runner.workspace }}/hdf5116/build/${{ inputs.preset_name }}-MSVC
+ files-folder: ${{ runner.workspace }}/hdf5/build116/${{ inputs.preset_name }}-MSVC
  files-folder-filter: msi
  file-digest: SHA256
  timestamp-rfc3161: http://timestamp.acs.microsoft.com
@@ -168,12 +168,12 @@ jobs:
  id: publish-ctest-binary
  run: |
  mkdir "${{ runner.workspace }}/build116"
- mkdir "${{ runner.workspace }}/build/hdf5"
- Copy-Item -Path ${{ runner.workspace }}/hdf5/${{ steps.set-file-base.outputs.SOURCE_BASE }}/COPYING -Destination ${{ runner.workspace }}/build/hdf5/
- Copy-Item -Path ${{ runner.workspace }}/hdf5/${{ steps.set-file-base.outputs.SOURCE_BASE }}/COPYING_LBNL_HDF5 -Destination ${{ runner.workspace }}/build/hdf5/
- Copy-Item -Path ${{ runner.workspace }}/hdf5/build/${{ inputs.preset_name }}-MSVC/README.md -Destination ${{ runner.workspace }}/build/hdf5/
- Copy-Item -Path ${{ runner.workspace }}/hdf5/build/${{ inputs.preset_name }}-MSVC/* -Destination ${{ runner.workspace }}/build/hdf5/ -Include *.zip
- cd "${{ runner.workspace }}/build"
+ mkdir "${{ runner.workspace }}/build116/hdf5"
+ Copy-Item -Path ${{ runner.workspace }}/hdf5/${{ steps.set-file-base.outputs.SOURCE_BASE }}/COPYING -Destination ${{ runner.workspace }}/build116/hdf5/
+ Copy-Item -Path ${{ runner.workspace }}/hdf5/${{ steps.set-file-base.outputs.SOURCE_BASE }}/COPYING_LBNL_HDF5 -Destination ${{ runner.workspace }}/build116/hdf5/
+ Copy-Item -Path ${{ runner.workspace }}/hdf5/build116/${{ inputs.preset_name }}-MSVC/README.md -Destination ${{ runner.workspace }}/build116/hdf5/
+ Copy-Item -Path ${{ runner.workspace }}/hdf5/build116/${{ inputs.preset_name }}-MSVC/* -Destination ${{ runner.workspace }}/build116/hdf5/ -Include *.zip
+ cd "${{ runner.workspace }}/build116"
  7z a -tzip ${{ steps.set-file-base.outputs.FILE_BASE }}-win-vs2022_cl.zip hdf5
  shell: pwsh
 
@@ -488,7 +488,7 @@ jobs:
  NOTARY_USER: ${{ vars.NOTARY_USER }}
  NOTARY_KEY: ${{ vars.NOTARY_KEY }}
  run: |
- /usr/bin/xcrun stapler staple ${{ runner.workspace }}/hdf5/build/${{ inputs.preset_name }}-macos-Clang/*.dmg
+ /usr/bin/xcrun stapler staple ${{ runner.workspace }}/hdf5/build116/${{ inputs.preset_name }}-macos-Clang/*.dmg
  if: ${{ needs.check-secret.outputs.sign-state == 'exists' }}
  shell: bash
  continue-on-error: true

.github/workflows/daily-build.yml

@@ -84,9 +84,9 @@ jobs:
  needs: [get-old-names, call-workflow-tarball, call-workflow-ctest]
  uses: ./.github/workflows/abi-report.yml
  with:
- file_ref: '1.14.4.3'
+ file_ref: '1.14.5'
  file_base: ${{ needs.call-workflow-tarball.outputs.file_base }}
- use_tag: snapshot
+ use_tag: snapshot-1.16
  use_environ: snapshots
  if: ${{ ((needs.call-workflow-tarball.outputs.has_changes == 'true') || (needs.get-old-names.outputs.run-ignore == 'ignore')) }}
 

.github/workflows/hdfeos5.yml

@@ -5,7 +5,7 @@ on:
  workflow_dispatch:
  push:
  pull_request:
- branches: [ develop ]
+ branches: [ hdf5_1_16 ]
  paths-ignore:
  - '.github/CODEOWNERS'
  - '.github/FUNDING.yml'

.github/workflows/intel-auto.yml

@@ -1,4 +1,4 @@
-name: hdf5 1.16 autotools icx
+name: hdf5 1.16 autotools icx CI
 
 # Triggers the workflow on a call from another workflow
 on:

.github/workflows/intel-cmake.yml

@@ -1,4 +1,4 @@
-name: hdf5 1.16 CMake icx
+name: hdf5 1.16 CMake icx CI
 
 # Triggers the workflow on a call from another workflow
 on:

CMakePresets.json

@@ -81,7 +81,7 @@
  "HDF5_ENABLE_PLUGIN_SUPPORT": "ON",
  "H5PL_ALLOW_EXTERNAL_SUPPORT": {"type": "STRING", "value": "TGZ"},
  "PLUGIN_PACKAGE_NAME": {"type": "STRING", "value": "pl"},
- "PLUGIN_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/HDFGroup/hdf5_plugins/releases/download/snapshot"},
+ "PLUGIN_TGZ_ORIGPATH": {"type": "STRING", "value": "https://github.com/HDFGroup/hdf5_plugins/releases/download/snapshot-1.16"},
  "PLUGIN_TGZ_NAME": {"type": "STRING", "value": "hdf5_plugins-1.16.tar.gz"}
  }
  },

HDF5Examples/README.md

@@ -46,7 +46,7 @@ Full Documentation and Programming Resources for this HDF5 can be found at
 
 Periodically development code snapshots are provided at the following URL:
 
- https://github.com/HDFGroup/hdf5/releases/tag/snapshot
+ https://github.com/HDFGroup/hdf5/releases/tag/snapshot-1.16
 
 Source packages for current and previous releases are located at:
 

README.md

@@ -2,17 +2,9 @@ HDF5 version 1.16.0-1 currently under development
 
 ![HDF5 Logo](doxygen/img/HDF5.png)
 
-[![develop cmake build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/cmake.yml?branch=develop&label=HDF5%20develop%20CMake%20CI)](https://github.com/HDFGroup/hdf5/actions/workflows/cmake.yml?query=branch%3Adevelop)
-[![develop autotools build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/autotools.yml?branch=develop&label=HDF5%20develop%20Autotools%20CI)](https://github.com/HDFGroup/hdf5/actions/workflows/autotools.yml?query=branch%3Adevelop)
-[![HDF-EOS5 build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/hdfeos5.yml?branch=develop&label=HDF-EOS5)](https://github.com/HDFGroup/hdf5/actions/workflows/hdfeos5.yml?query=branch%3Adevelop)
-[![netCDF build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/netcdf.yml?branch=develop&label=netCDF)](https://github.com/HDFGroup/hdf5/actions/workflows/netcdf.yml?query=branch%3Adevelop)
-[![h5py build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/h5py.yml?branch=develop&label=h5py)](https://github.com/HDFGroup/hdf5/actions/workflows/h5py.yml?query=branch%3Adevelop)
-[![CVE regression](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/cve.yml?branch=develop&label=CVE)](https://github.com/HDFGroup/hdf5/actions/workflows/cve.yml?query=branch%3Adevelop)
-[![HDF5 VOL connectors build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/vol.yml?branch=develop&label=HDF5-VOL)](https://github.com/HDFGroup/hdf5/actions/workflows/vol.yml?query=branch%3Adevelop)
-[![HDF5 VFD build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/vfd.yml?branch=develop&label=HDF5-VFD)](https://github.com/HDFGroup/hdf5/actions/workflows/vfd.yml?query=branch%3Adevelop)
-[![1.14 cmake build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/cmake.yml?branch=hdf5_1_14&label=HDF5%201.14%20CMake%20CI)](https://github.com/HDFGroup/hdf5/actions/workflows/cmake.yml?query=branch%3Ahdf5_1_14)
-[![1.14 autotools build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/autotools.yml?branch=hdf5_1_14&label=HDF5%201.14%20Autotools%20CI)](https://github.com/HDFGroup/hdf5/actions/workflows/autotools.yml?query=branch%3Ahdf5_1_14)
-[![BSD](https://img.shields.io/badge/License-BSD-blue.svg)](https://github.com/HDFGroup/hdf5/blob/develop/COPYING)
+[![1.14 cmake build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/cmake.yml?branch=hdf5_1_16&label=HDF5%201.16%20CMake%20CI)](https://github.com/HDFGroup/hdf5/actions/workflows/cmake.yml?query=branch%3Ahdf5_1_16)
+[![1.14 autotools build status](https://img.shields.io/github/actions/workflow/status/HDFGroup/hdf5/autotools.yml?branch=hdf5_1_16&label=HDF5%201.16%20Autotools%20CI)](https://github.com/HDFGroup/hdf5/actions/workflows/autotools.yml?query=branch%3Ahdf5_1_16)
+[![BSD](https://img.shields.io/badge/License-BSD-blue.svg)](https://github.com/HDFGroup/hdf5/blob/hdf5_1_16/COPYING)
 
 [HPC configure/build/test results](https://my.cdash.org/index.php?project=HDF5)
 
@@ -29,17 +21,17 @@ tools, and services at [The HDF Group's website](https://www.hdfgroup.org/).
 
 DOCUMENTATION
 -------------
-Documentation for all HDF software is available at:
+This release is fully functional for the API described in the documentation.
 
- https://support.hdfgroup.org/documentation/index.html
+ https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/_l_b_a_p_i.html
 
-Documentation for the current HDF5 library release is available at:
+Full Documentation and Programming Resources for this release can be found at
 
- https://support.hdfgroup.org/releases/hdf5/latest-docs.html
+ https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/index.html
 
-The latest Doxygen documentation generated on changes to `develop`, which does **not** correspond to any particular library release, is available at:
+The latest doxygen documentation generated on changes to HDF5 1.16.x is available at:
 
- https://hdfgroup.github.io/hdf5/develop 
+ https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen
 
 See the [RELEASE.txt](release_docs/RELEASE.txt) file in the [release_docs/](release_docs/) directory for information specific
 to the features and updates included in this release of the library.
@@ -78,34 +70,12 @@ Posting requires completing a simple registration and allows one to join in the
 conversation. Please read the [instructions](https://forum.hdfgroup.org/t/quickstart-guide-welcome-to-the-new-hdf-forum
 ) pertaining to the Forum's use and configuration.
 
-RELEASE SCHEDULE
-----------------
-
-![HDF5 release schedule](doc/img/release-schedule.png) 
-
-HDF5 does not release on a regular schedule. Instead, releases are driven by
-new features and bug fixes, though we try to have at least one release of each
-maintenance branch per year. Future HDF5 releases indicated on this schedule
-are tentative.
-
-| Release | New Features |
-| ------- | ------------ |
-| 1.14.5 | oss-fuzz fixes, ros3 VFD improvements |
-| 1.14.6 | Last maintenance release of 1.14 |
-| 1.16.0 | Complex number support, updated library defaults (cache sizes, etc.) |
-| 2.0.0 | Multi-threaded HDF5, crashproofing / metadata journaling, Full (VFD) SWMR, encryption, digital signatures, sparse datasets, improved storage for variable-length datatypes, better Unicode support (especially on Windows), semantic versioning |
-
-Some HDF5 2.0.0 features listed here may be released in a 1.16.x release.
-
-This list of feature release versions is also tentative, and the specific release
-in which a feature is introduced may change.
-
 
 SNAPSHOTS, PREVIOUS RELEASES AND SOURCE CODE
 --------------------------------------------
 Periodically development code snapshots are provided at the following URL:
 
- https://github.com/HDFGroup/hdf5/releases/tag/snapshot
+ https://github.com/HDFGroup/hdf5/releases/tag/snapshot-1.16
 
 Source packages for current and previous releases are located at:
 

config/cmake/cacheinit.cmake

@@ -79,7 +79,7 @@ set (KWSYS_USE_LOCALCONTENT OFF CACHE BOOL "Use local file for KWSYS FetchConten
 # filter plugin options
 ########################
 
-set (PLUGIN_TGZ_ORIGPATH "https://github.com/HDFGroup/hdf5_plugins/releases/download/snapshots" CACHE STRING "Use PLUGINS from original location" FORCE)
+set (PLUGIN_TGZ_ORIGPATH "https://github.com/HDFGroup/hdf5_plugins/releases/download/snapshot-1.16" CACHE STRING "Use PLUGINS from original location" FORCE)
 set (PLUGIN_TGZ_NAME "hdf5_plugins-1.16.tar.gz" CACHE STRING "Use PLUGINS from compressed file" FORCE)
 set (PLUGIN_USE_LOCALCONTENT ON CACHE BOOL "Use local file for PLUGIN FetchContent" FORCE)
 set (PLUGIN_PACKAGE_NAME "pl" CACHE STRING "Name of PLUGIN package" FORCE)

doc/parallel-compression.md

@@ -333,19 +333,19 @@ hid_t file_id = H5Fcreate("file.h5", H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id);
 ...
 ```
 
-[u1]: https://github.com/HDFGroup/hdf5/blob/develop/HDF5Examples/C/H5PAR/ph5_filtered_writes.c
-[u2]: https://github.com/HDFGroup/hdf5/blob/develop/HDF5Examples/C/H5PAR/ph5_filtered_writes_no_sel.c
-[u3]: https://hdfgroup.github.io/hdf5/develop/group___h5_d.html#gaf6213bf3a876c1741810037ff2bb85d8
-[u4]: https://hdfgroup.github.io/hdf5/develop/group___h5_d.html#ga8eb1c838aff79a17de385d0707709915
-[u5]: https://hdfgroup.github.io/hdf5/develop/group___d_c_p_l.html#ga85faefca58387bba409b65c470d7d851
-[u6]: https://hdfgroup.github.io/hdf5/develop/group___d_c_p_l.html#ga4335bb45b35386daa837b4ff1b9cd4a4
-[u7]: https://hdfgroup.github.io/hdf5/develop/group___d_c_p_l.html#ga6bd822266b31f86551a9a1d79601b6a2
+[u1]: https://github.com/HDFGroup/hdf5/blob/hdf5_1_16/HDF5Examples/C/H5PAR/ph5_filtered_writes.c
+[u2]: https://github.com/HDFGroup/hdf5/blob/hdf5_1_16/HDF5Examples/C/H5PAR/ph5_filtered_writes_no_sel.c
+[u3]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___h5_d.html#gaf6213bf3a876c1741810037ff2bb85d8
+[u4]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___h5_d.html#ga8eb1c838aff79a17de385d0707709915
+[u5]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___d_c_p_l.html#ga85faefca58387bba409b65c470d7d851
+[u6]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___d_c_p_l.html#ga4335bb45b35386daa837b4ff1b9cd4a4
+[u7]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___d_c_p_l.html#ga6bd822266b31f86551a9a1d79601b6a2
 [u8]: https://www.hdfgroup.org/2022/03/04/parallel-compression-improvements-in-hdf5-1-13-1/
 [u9]: https://support.hdfgroup.org/releases/hdf5/documentation/advanced_topics/chunking_in_hdf5.md
 [u10]: https://support.hdfgroup.org/releases/hdf5/documentation/hdf5_topics/HDF5ImprovingIOPerformanceCompressedDatasets.pdf
-[u11]: https://hdfgroup.github.io/hdf5/develop/group___f_a_p_l.html#gab99d5af749aeb3896fd9e3ceb273677a
-[u12]: https://hdfgroup.github.io/hdf5/develop/group___f_c_p_l.html#ga167ff65f392ca3b7f1933b1cee1b9f70
-[u13]: https://hdfgroup.github.io/hdf5/develop/group___f_c_p_l.html#gad012d7f3c2f1e1999eb1770aae3a4963
-[u14]: https://hdfgroup.github.io/hdf5/develop/group___d_x_p_l.html#ga001a22b64f60b815abf5de8b4776f09e
-[u15]: https://hdfgroup.github.io/hdf5/develop/group___d_x_p_l.html#gacb30d14d1791ec7ff9ee73aa148a51a3
-[u16]: https://hdfgroup.github.io/hdf5/develop/group___f_a_p_l.html#gacbe1724e7f70cd17ed687417a1d2a910
+[u11]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___f_a_p_l.html#gab99d5af749aeb3896fd9e3ceb273677a
+[u12]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___f_c_p_l.html#ga167ff65f392ca3b7f1933b1cee1b9f70
+[u13]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___f_c_p_l.html#gad012d7f3c2f1e1999eb1770aae3a4963
+[u14]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___d_x_p_l.html#ga001a22b64f60b815abf5de8b4776f09e
+[u15]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___d_x_p_l.html#gacb30d14d1791ec7ff9ee73aa148a51a3
+[u16]: https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/group___f_a_p_l.html#gacbe1724e7f70cd17ed687417a1d2a910

doxygen/aliases

@@ -10,14 +10,14 @@ ALIASES += ARCURL="\HDFURL/archive/support/HDF5/doc"
 # URL for documentation
 ALIASES += DOCURL="\HDFURL/releases/hdf5/documentation"
 # URL for downloads
-ALIASES += DWNURL="\HDFURL/releases/hdf5/downloads"
+ALIASES += DWNURL="\HDFURL/releases/hdf5/v1_16/v1_16_0/downloads"
 # URL for RFCs
 ALIASES += RFCURL="\DOCURL/rfc"
 ALIASES += AEXURL="\HDFURL/archive/support/ftp/HDF5/examples"
 # doxygen subdir (develop, v1_14)
-ALIASES += DOXURL="hdfgroup.github.io/hdf5/develop"
+ALIASES += DOXURL="\HDFURL/doxygen"
 #branch name (develop, hdf5_1_14)
-ALIASES += SRCURL="github.com/HDFGroup/hdf5/blob/develop"
+ALIASES += SRCURL="github.com/HDFGroup/hdf5/blob/hdf5_1_16"
 #Other projects that contribute to HDF5
 ALIASES += PRJURL="\HDFURL/projects"
 ALIASES += HVURL="github.com/HDFGroup/hdfview/blob/master"

doxygen/dox/ExamplesAPI.dox

@@ -7,7 +7,7 @@ Navigate back: \ref index "Main" / \ref GettingStarted
 The C, FORTRAN and Java examples below point to the examples in the hdf5-examples github repository. Examples for older versions of HDF5
 are handled by setting the appropriate USE_API_xxx definition. HDF5-1.6 examples are in a "16"-named subdirectory.
 
-The Java examples are in the develop source code, and the Java Object package examples are in the HDFView source.
+The Java examples are in the HDF5-1.16 source code, and the Java Object package examples are in the HDFView source.
 <em>Please note that you must comment out the "package" statement at the top when downloading a Java Object example individually.</em>
 
 The MATLAB and Python examples were generously provided by a user and are not tested.

doxygen/examples/H5.format.1.1.html

@@ -5558,8 +5558,8 @@ <h4><a name="FilterMessage">Name: Data Storage - Filter Pipeline</a></h4>
  <a name="Footnote1Change"><sup>1</sup></a>If you are reading
  an earlier version of this document, this link may have changed.
  If the link does not work, use the latest version of this document
- on <a href="https://hdfgroup.github.io/hdf5/develop/index.html">The HDF Group</a>&rsquo;s website,
- <a href="https://hdfgroup.github.io/hdf5/develop/_f_m_t11.html">
+ on <a href="https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/index.html">The HDF Group</a>&rsquo;s website,
+ <a href="https://support.hdfgroup.org/releases/hdf5/v1_16/v1_16_0/documentation/doxygen/_f_m_t11.html">
  <code>H5.format.html</code></a>;
  the link there will always be correct.
  <small><a href="#FilterMessage">(Return)</a>

doxygen/hdf5doxy_layout.xml

@@ -5,12 +5,8 @@
  <tab type="user" url="@ref GettingStarted" title="Getting started" />
  <tab type="user" url="@ref UG" title="User Guide" />
  <tab type="user" url="@ref RM" title="Reference Manual" />
- <!-- <tab type="user" url="https://support.hdfgroup.org/releases/hdf5/documentation/HDF5+Application+Developer%27s+Guide" title="Application Developer's Guide" />
- <tab type="user" url="https://support.hdfgroup.org/releases/hdf5/documentation/An_Overview_of_the_HDF5_Library_Architecture.v2.pdf" title="HDF5 Library Architecture Overview" /> -->
  <tab type="user" url="@ref Cookbook" title="Cookbook" />
  <tab type="user" url="@ref TN" title="Technical Notes" />
- <!-- <tab type="user" url="@ref VOL_Connector" title="HDF5 VOL Connector Author Guide" />
- <tab type="user" url="https://support.hdfgroup.org/releases/hdf5/documentation/HDF5+VOL+User%27s+Guide" title="HDF5 VOL User's Guide" /> -->
  <tab type="user" url="@ref RFC" title="RFCs" />
  <tab type="user" url="@ref SPEC" title="Specifications" />
  <tab type="user" url="@ref GLS" title="Glossary" />