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nboh committed Oct 10, 2023
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"\n",
"## Taxonomic Classification\n",
"\n",
"We can learn a lot from diversity metrics, alpha and beta. But to really dig into the data, we need to know what microbes are in each sample 🦠. To do this, we'll classify the reads in QIIME2 using a Bayesian classifier. Several such classifiers are available at https://docs.qiime2.org/2023.8/data-resources"
"We can learn a lot from diversity metrics, alpha and beta. But to really dig into the data, we need to know what microbes are in each sample 🦠. To do this, we'll classify the reads in QIIME2 using a Bayesian classifier. Several such classifiers are available at https://docs.qiime2.org/2023.7/data-resources"
]
},
{
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" --m-feature-metadata-file taxa.qza \\\n",
" --o-visualization community-tree-viz.qzv"
]
},
{
"cell_type": "code",
"source": [],
"metadata": {
"id": "iuYVBkQ0BoXm"
},
"execution_count": null,
"outputs": []
}
],
"metadata": {
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