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fix typo
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cdiener committed Mar 15, 2024
1 parent 3d4d6b5 commit 6cece2d
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ RUN apt-get update \
curl \
procps \
libcurl4-openssl-dev \
libsbmbl5-dev \
libsbml5-dev \
parallel

RUN echo "en_US.UTF-8 UTF-8" >> /etc/locale.gen \
Expand All @@ -37,7 +37,7 @@ ENV LANG en_US.UTF-8
RUN R -e 'install.packages(c("data.table", "stringr", "getopt", "reshape2", "doParallel", "foreach", "R.utils", "stringi", "glpkAPI", "CHNOSZ", "jsonlite", "remotes"))'
RUN R -e 'install.packages("BiocManager"); BiocManager::install("Biostrings")'
RUN R -e 'remotes::install_url("https://cran.r-project.org/src/contrib/Archive/sybil/sybil_2.2.0.tar.gz")'
RUN R -e 'remotes::install_url("https://cran.r-project.org/src/contrib/Archive/sybilSBML/sybilSBML_3.1.2.tar.gz")'
RUN R -e 'remotes::install_github("SysBioChalmers/sybil-SBML")'

RUN cd /opt && git clone https://github.com/jotech/gapseq
RUN cd /usr/bin && ln -s /opt/gapseq/gapseq
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