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Simplex tree ctors with data #2761

Simplex tree ctors with data

Simplex tree ctors with data #2761

Workflow file for this run

name: pip build osx
on: [push, pull_request]
env:
MACOSX_DEPLOYMENT_TARGET: 12.0
_PYTHON_HOST_PLATFORM: macosx-12.0-universal2
ARCHFLAGS: "-arch arm64 -arch x86_64"
jobs:
build:
# Should use macos-latest, but python 3.8 and 3.9 is no more available from macos-14
runs-on: macos-13
strategy:
max-parallel: 4
matrix:
python-version: ['3.9']
include:
- python-version: '3.9'
numpy-version: '1.21.4'
name: Build wheels for Python ${{ matrix.python-version }}
steps:
- uses: actions/checkout@v4
with:
submodules: true
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: x64
# For python >=3.9, numpy >= 2.0 for package build and ABI compatibility with numpy 1.X and 2.X
# cf. https://numpy.org/doc/stable/dev/depending_on_numpy.html#numpy-2-0-specific-advice
- name: Install dependencies
run: |
brew update || true
brew install boost eigen gmp mpfr cgal || true
python -m pip install --user numpy>=2.0
python -m pip install --user -r ext/gudhi-deploy/build-requirements.txt
python -m pip install --user delocate
./scripts/build_osx_universal_gmpfr.sh
# Now the universal libraries are in $PWD/deps-uni/lib
- name: Build python wheel
run: |
export GMP_LIB_DIR=$PWD/deps-uni/lib
export GMPXX_LIB_DIR=$PWD/deps-uni/lib
export MPFR_LIB_DIR=$PWD/deps-uni/lib
python --version
mkdir build
cd build
cmake -DCMAKE_BUILD_TYPE=Release ..
cd src/python
python -m build -n -w
export PATH="$PATH:`python -m site --user-base`/bin"
delocate-wheel --require-archs universal2 -v dist/*.whl
# Test ABI compatibility with numpy 1.X
- name: Install and test python wheel
run: |
python -m pip install --user numpy~=${{ matrix.numpy-version }}
python -m pip install --user pytest build/src/python/dist/*.whl
python -c "import gudhi; print(gudhi.__version__)"
python -m pytest -v src/python/test/test_alpha_complex.py
python -m pytest -v src/python/test/test_delaunay_complex.py
python -m pytest -v src/python/test/test_bottleneck_distance.py
python -m pytest -v src/python/test/test_cubical_complex.py
python -m pytest -v src/python/test/test_rips_complex.py
- name: Upload OSx python wheel
uses: actions/upload-artifact@v4
with:
name: osx python wheel
path: build/src/python/dist/*.whl