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 <meta name="author" content="Shannon Dunnigan Kimmel">
 <meta name="author" content="Kathryn Petrinec">
+<meta name="author" content="Megan Howkins">
 <meta name="author" content="Nikki Dix">
 
 <title>2023 Quarterly System-Wide Monitoring Program (SWMP) Report</title>
@@ -246,6 +247,7 @@ <h1 class="title">2023 Quarterly System-Wide Monitoring Program (SWMP) Report</h
     <div class="quarto-title-meta-contents">
              <p>Shannon Dunnigan Kimmel </p>
              <p>Kathryn Petrinec </p>
+             <p>Megan Howkins </p>
              <p>Nikki Dix </p>
           </div>
   </div>

sitemap.xml

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 <urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/index.html</loc>
-    <lastmod>2024-01-30T14:57:15.169Z</lastmod>
+    <lastmod>2024-02-05T18:55:38.980Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/background.html</loc>
-    <lastmod>2024-01-30T14:57:15.179Z</lastmod>
+    <lastmod>2024-02-05T18:55:38.980Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/sites.html</loc>
-    <lastmod>2024-01-30T14:57:15.207Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.011Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/collection.html</loc>
-    <lastmod>2024-01-30T14:57:15.214Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.017Z</lastmod>
   </url>
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     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/qaqc.html</loc>
-    <lastmod>2024-01-30T14:57:15.219Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.017Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/results.html</loc>
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+    <lastmod>2024-02-05T18:55:39.017Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/environmental.html</loc>
-    <lastmod>2024-01-30T14:57:15.244Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.033Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/nut-indicators.html</loc>
-    <lastmod>2024-01-30T14:57:15.274Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.095Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/environmental-drivers.html</loc>
-    <lastmod>2024-01-30T14:57:15.410Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.133Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/misc-bac.html</loc>
-    <lastmod>2024-01-30T14:57:15.426Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.133Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/maintenance.html</loc>
-    <lastmod>2024-01-30T14:57:15.437Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.133Z</lastmod>
   </url>
   <url>
     <loc>https://GTMNERR.github.io/swmp-quarter-report/text/a1-cmecs.html</loc>
-    <lastmod>2024-01-30T14:57:15.450Z</lastmod>
+    <lastmod>2024-02-05T18:55:39.149Z</lastmod>
   </url>
 </urlset>

text/collection.html

@@ -292,7 +292,7 @@ <h2 data-number="2.3" class="anchored" data-anchor-id="water-quality-discrete"><
 <p></p><figcaption class="figure-caption">Figure&nbsp;2.2: Collection methods for nutrient analyses</figcaption><p></p>
 </figure>
 </div>
-<p>Water samples collected between January 1, 2003 and June 30, 2010 were collected and analyzed by University of Florida’s (UF) Department of Fisheries and Aquatic Sciences. Samples collected between July 1, 2010 and November 30, 2012 were collected by GTMNERR and analyzed by the UF lab. Samples collected on or after December 1, 2012 were collected by GTMNERR and analyzed by the Florida Department of Environmental Protection’s (FDEP) Central Laboratory. Both laboratories were certified through the National Environmental Laboratory Accreditation Program and used the American Public Health Association and Environmental Protection Agency methods for analyses. Method details can be found in annual metadata files at www.nerrsdata.org.</p>
+<p>Water samples collected between January 1, 2003 and June 30, 2010 were collected and analyzed by University of Florida’s (UF) Department of Fisheries and Aquatic Sciences. Samples collected between July 1, 2010 and November 30, 2012 were collected by GTMNERR and analyzed by the UF lab. Samples collected on or after December 1, 2012 were collected by GTMNERR and analyzed by the Florida Department of Environmental Protection’s (FDEP) Central Laboratory. Both laboratories were certified through the National Environmental Laboratory Accreditation Program and used the American Public Health Association and Environmental Protection Agency methods for analyses. Method details can be found in annual metadata files which are downloadable from (https://cdmo.baruch.sc.edu).</p>
 
 
 </section>
@@ -569,7 +569,7 @@ <h2 data-number="2.3" class="anchored" data-anchor-id="water-quality-discrete"><
     <div class="nav-footer-right">Built with <a href="https://quarto.org/">Quarto</a>.</div>
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 </footer>
-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","descPosition":"bottom","closeEffect":"zoom","openEffect":"zoom","loop":true});</script>
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","closeEffect":"zoom","loop":true,"openEffect":"zoom","descPosition":"bottom"});</script>
 
 
 

text/misc-bac.html

@@ -577,7 +577,7 @@ <h2 data-number="7.3" class="anchored" data-anchor-id="bacteria"><span class="he
     <div class="nav-footer-right">Built with <a href="https://quarto.org/">Quarto</a>.</div>
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-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","loop":true,"descPosition":"bottom","openEffect":"zoom","closeEffect":"zoom"});</script>
+<script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","selector":".lightbox","descPosition":"bottom","openEffect":"zoom","loop":true});</script>
 
 
 

text/nut-indicators.html

@@ -277,11 +277,11 @@ <h1 class="title"><span class="chapter-number">5</span>&nbsp; <span class="chapt
 </div>
 <section id="summary" class="level2" data-number="5.1">
 <h2 data-number="5.1" class="anchored" data-anchor-id="summary"><span class="header-section-number">5.1</span> Summary</h2>
-<p>Most of the stations reported daily average dissolved oxygen values on the lower end of their average ranges in the first quarter of the year (<a href="#fig-do">Figure&nbsp;<span>5.1</span></a>), generally coinciding with the higher temperatures observed during the same period of time (<a href="environmental.html#fig-range-temp">Figure&nbsp;<span>4.4</span></a>). Daily averages fell outside average ranges at Pine Island several times throughout the year (<a href="#fig-do-1">Figure&nbsp;<span>5.1 (a)</span></a>). When temperatures were warmer (Jan-Mar, Aug), the values were lower than the average limit. After the cooler weather in October and the various weather events in the fall (Nor’easters and King Tides), the daily dissolved oxygen values increased above the average range. This year saw some of the lowest and most prolonged periods of dissolved oxygen at Pine Island in the last five years (<a href="#fig-do-pi">Figure&nbsp;<span>5.2</span></a>). Values fell below the 2 mg/L hypoxia threshold several times a day and for multiple days in August (<a href="#fig-do-pi-2">Figure&nbsp;<span>5.2 (b)</span></a>; <span class="quarto-unresolved-ref">?tbl-do-pi</span>).</p>
-<p>Pellicer Creek frequently experiences low dissolved oxygen events annually (<a href="#fig-do-pc-1">Figure&nbsp;<span>5.3 (a)</span></a>) and this year was no exception. Though daily averages were relatively within the average daily range (<a href="#fig-do-4">Figure&nbsp;<span>5.1 (d)</span></a>), closer inspection of the continuous data show several low dissolved oxygen events in July and August, in particular (<a href="#fig-do-pc-2">Figure&nbsp;<span>5.3 (b)</span></a>). The duration of these events were often not long and not as frequent as Pine Island (<span class="quarto-unresolved-ref">?tbl-do-pc</span>).</p>
+<p>Most of the stations reported daily average dissolved oxygen values on the lower end of their average ranges in the first quarter of the year (<a href="#fig-do">Figure&nbsp;<span>5.1</span></a>), generally coinciding with the higher temperatures observed during the same period of time (<a href="environmental.html#fig-range-temp">Figure&nbsp;<span>4.4</span></a>). Daily averages fell outside average ranges at Pine Island several times throughout the year (<a href="#fig-do-1">Figure&nbsp;<span>5.1 (a)</span></a>). When temperatures were warmer (Jan-Mar, Aug), the values were lower than the average limit. After the cooler weather in October and the various weather events in the fall (Nor’easters and King Tides), the daily dissolved oxygen values increased above the average range. This year saw some of the lowest and most prolonged periods of dissolved oxygen at Pine Island in the last five years (<a href="#fig-do-pi">Figure&nbsp;<span>5.2</span></a>). Values fell below the 2 mg/L hypoxia threshold several times a day and for multiple days in August (<a href="#fig-do-pi-2">Figure&nbsp;<span>5.2 (b)</span></a>; <a href="#tbl-pi-do">Table&nbsp;<span>5.1</span></a>).</p>
+<p>Pellicer Creek frequently experiences low dissolved oxygen events annually (<a href="#fig-do-pc-1">Figure&nbsp;<span>5.3 (a)</span></a>) and this year was no exception. Though daily averages were relatively within the average daily range (<a href="#fig-do-4">Figure&nbsp;<span>5.1 (d)</span></a>), closer inspection of the continuous data show several low dissolved oxygen events in July and August, in particular (<a href="#fig-do-pc-2">Figure&nbsp;<span>5.3 (b)</span></a>). The duration of these events were often not long and not as frequent as Pine Island (<a href="#tbl-pc-do">Table&nbsp;<span>5.2</span></a>).</p>
 <p>Chlorophyll <em>a</em> values were often higher than average at all stations this year (<a href="#fig-chla-boxplots">Figure&nbsp;<span>5.4</span></a>). Chlorophyll <em>a</em> at Pine Island more often fell above the state threshold (6.6 <span class="math inline">\(\mu\)</span>g/L) than below and record monthly high values were observed in January (7.0 <span class="math inline">\(\mu\)</span>g/L), March (9.8 <span class="math inline">\(\mu\)</span>g/L), and September (12 <span class="math inline">\(\mu\)</span>g/L) (<a href="#fig-chla-boxplots-1">Figure&nbsp;<span>5.4 (a)</span></a>). San Sebastian also saw high chlorophyll <em>a</em> for every month except November and December (data of which is not included in this report at this time) with a record high in January of 7.3 <span class="math inline">\(\mu\)</span>g/L. November, however, was much lower than normal at this station (<a href="#fig-chla-boxplots-2">Figure&nbsp;<span>5.4 (b)</span></a>). Elevated chlorophyll <em>a</em> was observed from May through July at Fort Matanzas (<a href="#fig-chla-boxplots-3">Figure&nbsp;<span>5.4 (c)</span></a>). Pellicer Creek was consistently high for most of the year, with a record value in March (14.5 <span class="math inline">\(\mu\)</span>g/L), but experienced lower than normal ranges in October and November (<a href="#fig-chla-boxplots-4">Figure&nbsp;<span>5.4 (d)</span></a>). Annual geometric mean (AGM) chlorophyll <em>a</em> values were high and above the state threshold levels at all sites except for Fort Matanzas (<a href="#fig-chla-agm">Figure&nbsp;<span>5.5</span></a>). These values do not include data from December 2023 as that data has not been received from the laboratory as of the current edition of this report. Therefore, these values are likely to change following the addition of the final month of the year.</p>
 <p>Interpretations of patterns in total nitrogen (TN) and dissolved inorganic nitrogen (DIN) were difficult this year since quite a bit of the values were not able to be calculated. At Pine Island and Pellicer Creek, however, high TN was observed in the high rainfall months of July and August and also in November (<a href="#fig-tn-boxplots">Figure&nbsp;<span>5.6</span></a>). Total Kjeldahl Nitrogen (TKN) was lower than average for most stations; however, all stations experienced higher levels in May, August, and November (<a href="#fig-tkn-boxplots">Figure&nbsp;<span>5.8</span></a>).</p>
-<p>Total phosphorus continues to fall below the state threshold for every station and similar to TKN, all stations experienced elevated values of total phosphorus and orthophosphate in May (<a href="#fig-tp-boxplots">Figure&nbsp;<span>5.9</span></a>; <a href="#fig-po4-boxplots">Figure&nbsp;<span>5.10</span></a>). Relatively high levels of orthophosphate were observed at Pine Island January through May and again in August (<a href="#fig-po4-boxplots">Figure&nbsp;<span>5.10</span></a>).</p>
+<p>Total phosphorus continues to fall below the state threshold for every station and similar to TKN, all stations experienced elevated values of total phosphorus and orthophosphate in May (<a href="#fig-tp-boxplots">Figure&nbsp;<span>5.9</span></a>; <a href="#fig-po4-boxplots">Figure&nbsp;<span>5.10</span></a>). Relatively high levels of orthophosphate were observed at Pine Island January through May and again in August (<a href="#fig-po4-boxplots-1">Figure&nbsp;<span>5.10 (a)</span></a>).</p>
 </section>
 <section id="data" class="level2" data-number="5.2">
 <h2 data-number="5.2" class="anchored" data-anchor-id="data"><span class="header-section-number">5.2</span> Data</h2>
@@ -666,7 +666,7 @@ <h3 data-number="5.2.2" class="anchored" data-anchor-id="chlorophyll-a"><span cl
 </figure>
 </div>
 </div>
-<p></p><figcaption class="figure-caption">Figure&nbsp;5.5: Annual geometric means of monthly chlorophyll <em>a</em> at each SWMP water quality station. Horizontal dashed blue line indicates the state threshold, as found in F.A.C 62-302.530. Values exceeding the threshold are indicated in red. The 2022 value is based upon data to date and does not equal an entire year of data.</figcaption><p></p>
+<p></p><figcaption class="figure-caption">Figure&nbsp;5.5: Annual geometric means of monthly chlorophyll <em>a</em> at each SWMP water quality station. Horizontal dashed blue line indicates the state threshold, as found in F.A.C 62-302.530. Values exceeding the threshold are indicated in red. The 2023 value is based upon data to date and does not equal an entire year of data.</figcaption><p></p>
 </figure>
 </div>
 </section>
@@ -1120,7 +1120,7 @@ <h4 data-number="5.2.4.2" class="anchored" data-anchor-id="orthophosphate"><span
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+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","closeEffect":"zoom","loop":true,"openEffect":"zoom","descPosition":"bottom"});</script>