added brca cspec assays path to production

GC-HBOC · Feb 21, 2024 · bb99e26 · bb99e26
1 parent 426eebe
commit bb99e26
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/src/common/paths.py b/src/common/paths.py
@@ -269,6 +269,10 @@ def joinpaths(path, *paths):
     bayesdel = joinpaths(datadir, "BayesDEL/bayesdel_4.4.vcf.gz")
     cosmic = joinpaths(datadir, "COSMIC/cosmic_cmc.vcf.gz")
 
+    # assays
+    cspec_brca_assays_splicing = joinpaths(datadir, "CSpec_BRCA_assays/splicing_assays.vcf.gz")
+    cspec_brca_assays_functional = joinpaths(datadir, "CSpec_BRCA_assays/functional_assays.vcf.gz")
+
     # IGV data
     igv_data_path = joinpaths(workdir, "src/frontend_celery/webapp/static/packages/igv/data")