add os.environ['TEMP'] as outputdir/tmp for pytorch tmp-dir #89
Workflow file for this run
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| # Continuous integration testing for ChRIS Plugin. | |
| # https://github.com/FNNDSC/python-chrisapp-template/wiki/Continuous-Integration | |
| # | |
| # - on push to main: build and push container images as ":latest" | |
| # - on push to semver tag: build and push container image with tag and | |
| # upload plugin description to https://chrisstore.co | |
| name: build | |
| on: | |
| push: | |
| branches: [ main ] | |
| tags: | |
| - "v?[0-9]+.[0-9]+.[0-9]+*" | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| build: | |
| name: Build | |
| if: github.event_name == 'push' || github.event_name == 'release' | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - name: Stop docker | |
| run: sudo systemctl stop docker | |
| - name: Clean docker data | |
| run: | | |
| sudo rm -rf /var/lib/docker | |
| sudo mkdir /var/lib/docker | |
| - name: Maximize build space | |
| uses: easimon/maximize-build-space@fc881a613ad2a34aca9c9624518214ebc21dfc0c | |
| with: | |
| root-reserve-mb: 8192 # space needed for logs | |
| swap-size-mb: 1 # must be >0 | |
| build-mount-path: /var/lib/docker | |
| remove-dotnet: 'true' | |
| remove-android: 'true' | |
| remove-haskell: 'true' | |
| remove-codeql: 'true' | |
| remove-docker-images: 'false' | |
| - name: Start docker | |
| run: sudo systemctl start docker | |
| - name: Decide image tags | |
| id: info | |
| shell: python | |
| run: | | |
| import os | |
| import itertools | |
| def join_tag(t): | |
| registry, repo, tag = t | |
| return f'{registry}/{repo}:{tag}'.lower() | |
| registries = ['docker.io', 'ghcr.io'] | |
| repos = ['${{ github.repository }}'] | |
| if '${{ github.ref_type }}' == 'branch': | |
| tags = ['latest'] | |
| elif '${{ github.ref_type }}' == 'tag': | |
| tag = '${{ github.ref_name }}' | |
| version = tag[1:] if tag.startswith('v') else tag | |
| tags = ['latest', version] | |
| else: | |
| tags = [] | |
| if '${{ github.ref_type }}' == 'tag': | |
| local_tag = join_tag(('ghcr.io', '${{ github.repository }}', version)) | |
| else: | |
| local_tag = join_tag(('localhost:5000', '${{ github.repository }}', 'latest')) | |
| product = itertools.product(registries, repos, tags) | |
| tags_csv = ','.join(map(join_tag, product)) | |
| outputs = { | |
| 'tags_csv' : tags_csv, | |
| 'push' : 'true' if tags_csv else 'false', | |
| 'local_tag': local_tag | |
| } | |
| with open(os.environ['GITHUB_OUTPUT'], 'a') as out: | |
| for k, v in outputs.items(): | |
| out.write(f'{k}={v}\n') | |
| - name: Run local registry | |
| run: docker run --rm -d -p 5000:5000 registry:2 | |
| - uses: actions/checkout@v4 | |
| # QEMU is used for non-x86_64 builds | |
| - uses: docker/setup-qemu-action@v3 | |
| # buildx adds additional features to docker build | |
| - uses: docker/setup-buildx-action@v3 | |
| with: | |
| driver-opts: network=host | |
| - name: Login to DockerHub | |
| if: (github.event_name == 'push' || github.event_name == 'release') && contains(steps.info.outputs.tags_csv, 'docker.io') | |
| uses: docker/login-action@v3 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Login to GitHub Container Registry | |
| if: (github.event_name == 'push' || github.event_name == 'release') && contains(steps.info.outputs.tags_csv, 'ghcr.io') | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.repository_owner }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Build and push | |
| uses: docker/build-push-action@v5 | |
| if: (github.event_name == 'push' || github.event_name == 'release') | |
| with: | |
| context: . | |
| file: ./Dockerfile | |
| tags: ${{ steps.info.outputs.tags_csv }},${{ steps.info.outputs.local_tag }} | |
| platforms: linux/amd64 | |
| push: ${{ steps.info.outputs.push }} | |
| cache-to: type=gha,mode=max | |
| - name: Upload ChRIS Plugin | |
| id: upload | |
| if: github.ref_type == 'tag' | |
| uses: FNNDSC/upload-chris-plugin@v1 | |
| with: | |
| dock_image: ${{ steps.info.outputs.local_tag }} | |
| username: ${{ secrets.CHRISPROJECT_USERNAME }} | |
| password: ${{ secrets.CHRISPROJECT_PASSWORD }} | |
| chris_url: https://cube.chrisproject.org/api/v1/ | |
| compute_names: NERC | |
| pull: missing | |
| - name: Update DockerHub description | |
| if: steps.upload.outcome == 'success' | |
| uses: peter-evans/dockerhub-description@v3 | |
| continue-on-error: true # it is not crucial that this works | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| short-description: ${{ steps.upload.outputs.title }} | |
| readme-filepath: ./README.md |