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New search space def #131

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merged 7 commits into from
May 15, 2024
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@perib perib commented May 15, 2024

added a function to convert tpot1 configuration dictionaries into tpot2 search spaces.

added an EstimatorTransfomer (similar to tpot1 stacking classifier) that allows for things like passthrough, cross_val predict. Coverts the classifiers/regressors into transformers and allows the user to select which function it will use for the transformation.

some edits/bug fixes to union and wrapper pipelines

modified the baseindividual to have a fixed crossover function that automatically checks if two individuals are compatible. this prevents a crash when two different node types try to crossover with each other. now the crossover functions are defined in _crossover()

some graph crossover functions where previously not included in the list to be selected from. I added a couple of those back in.

fixed some bugs/crashes with some unique_ids. create a new class that holds tuples of components for the list-based individuals.

added in the wrapped selection functions to the default classifier and default regressor search spaces.

@perib perib merged commit 8728fff into EpistasisLab:search_space_api May 15, 2024
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