work on rural entities for #272

EnvironmentOntology · Feb 3, 2016 · 4488bbf · 4488bbf
1 parent 2b7f5bb
commit 4488bbf
Showing 1 changed file with 23 additions and 2 deletions.
diff --git a/src/envo/envo-edit.owl b/src/envo/envo-edit.owl
@@ -2064,6 +2064,9 @@ Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000767>))
 Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000768>))
 Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000769>))
 Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000770>))
+Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000771>))
+Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000772>))
+Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01000773>))
 Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01001303>))
 Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01001304>))
 Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_01001305>))
@@ -15086,10 +15089,12 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://pu
 AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000218> "Preliminary definition. The semantics and definitions of \"mediterranean\", \"subtropical\", \"tropical\", \"temperate\", \"polar\", and similar climate types may be transferred to an \"environmental condition\" class once the semantics of this class have been established."^^xsd:string)
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000218> <http://purl.obolibrary.org/obo/ENVO_01000176>)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/ENVO_01000219> "ENVO"^^xsd:string)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_01000219> "human biome")
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#created_by> <http://purl.obolibrary.org/obo/ENVO_01000219> "ORCID:0000-0002-4366-3088"^^xsd:string)
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_01000219> "anthrome")
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.eoearth.org/view/article/150128/") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000219> "An anthropogenic terrestrial biome is a terrestrial biome which has community structures determined by human activity."^^xsd:string)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000219> "anthropogenic terrestrial biome"^^xsd:string)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#creation_date> <http://purl.obolibrary.org/obo/ENVO_01000219> "2013-04-07T14:45:22Z"^^xsd:string)
-AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000219> "An anthropogenic terrestrial biome is a terrestrial biome which has community structures determined by human activity."^^xsd:string)
 AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000219> "Preliminary definition."^^xsd:string)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/ENVO_01000219> "ENVO:01000219"^^xsd:string)
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000219> <http://purl.obolibrary.org/obo/ENVO_00000446>)
@@ -15305,6 +15310,7 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespac
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#created_by> <http://purl.obolibrary.org/obo/ENVO_01000245> "ORCID:0000-0002-4366-3088"^^xsd:string)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#creation_date> <http://purl.obolibrary.org/obo/ENVO_01000245> "2013-06-14T11:45:47Z"^^xsd:string)
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000245> <http://purl.obolibrary.org/obo/ENVO_01000219>)
+AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000246> "Villages are also described as agricultural settlements with greater than 100 persons per square kilometre; however, no upper limit is defined.")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000246> "village biome"^^xsd:string)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#creation_date> <http://purl.obolibrary.org/obo/ENVO_01000246> "2013-06-14T11:45:47Z"^^xsd:string)
 AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#created_by> <http://purl.obolibrary.org/obo/ENVO_01000246> "ORCID:0000-0002-4366-3088"^^xsd:string)
@@ -18051,10 +18057,11 @@ AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000762>
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000762> "sparsely populated settlement"@en)
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000762> "A settlement with a low density of buildings and inhabitants.")
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000762> <http://purl.obolibrary.org/obo/ENVO_00000062>)
-AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000763> "There are many definitions of what makes a region or settlement rural. See Issue #272.")
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000763> "rural settlement"@en)
+AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000763> "A class created fro SDGIO. The definition of rural is highly varied, dealing with areas, settlements, and populations interchangeably. The 'rural' classes in ENVO aim to clarify these differing definitions. See issue #272.")
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.fao.org/docrep/015/am085e/am085e.pdf") Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "https://en.wikipedia.org/wiki/Rural_area") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000763> "A settlement which has lower population density than a town, city, or other urban environment and is primarily used for agricultural or pastoral activity.")
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000763> <http://purl.obolibrary.org/obo/ENVO_01000762>)
+SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000763> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0001025> <http://purl.obolibrary.org/obo/ENVO_01000772>))
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000764> "formal settlement"@en)
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000764> "A settlement which has been established and is managed through officially sanctioned processes and is recognised as legal by a competent authority.")
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000116> <http://purl.obolibrary.org/obo/ENVO_01000764> "This is merely a defined class and should not have too many subclasses.")
@@ -18088,6 +18095,20 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000770> <http://purl.obolibrar
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000770> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000086> <http://purl.obolibrary.org/obo/PATO_0001547>))
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000770> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002353> <http://purl.obolibrary.org/obo/ENVO_01000769>))
 SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000770> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002473> <http://purl.obolibrary.org/obo/CHEBI_16526>))
+AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000771> "Created for SDGIO, indicator 9.1.1. See #272.")
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.nationsencyclopedia.com/WorldStats/ADI-access-season-road-definition.html") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000771> "A road which is usable across all seasons.")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/ENVO_01000771> "all-season road")
+AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym> <http://purl.obolibrary.org/obo/ENVO_01000771> "permanent road")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000771> "all season road"@en)
+SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000771> <http://purl.obolibrary.org/obo/ENVO_00000064>)
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://www.fao.org/docrep/015/am085e/am085e.pdf") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000772> "An area which is outside of a town, city, or urban area. Rural areas are primarily used for agriculture or pastoralism and may contain rural settlements.")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000772> "rural area"@en)
+AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01000772> "A class created fro SDGIO. The definition of rural is highly varied, dealing with areas, settlements, and populations interchangeably. The 'rural' classes in ENVO aim to clarify these differing definitions. See issue #272.")
+SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000772> <http://purl.obolibrary.org/obo/ENVO_01000408>)
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01000773> "village"@en)
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "https://en.wikipedia.org/wiki/Village") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01000773> "A village is a clustered human settlement or community, larger than a hamlet but smaller than a town, with a population ranging from a few hundred to a few thousand. Though often located in rural areas, the term urban village is also applied to certain urban neighbourhoods. Villages are normally permanent, with fixed dwellings; however, transient villages can occur. Further, the dwellings of a village are fairly close to one another, not scattered broadly over the landscape, as a dispersed settlement.")
+AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000116> <http://purl.obolibrary.org/obo/ENVO_01000773> "This class may be split. \"urban village\" doesn't sit well and prevents relations to village biomes.")
+SubClassOf(<http://purl.obolibrary.org/obo/ENVO_01000773> <http://purl.obolibrary.org/obo/ENVO_00000062>)
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_01001303> "environmental role")
 AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_01001303> "A role which is may be realised by an environmental system")
 AnnotationAssertion(rdfs:comment <http://purl.obolibrary.org/obo/ENVO_01001303> "Experimental class.")