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some edits to the Makefile
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pbuttigieg committed Jan 22, 2016
1 parent dd787fc commit 0a3b714
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion src/envo/Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -127,14 +127,16 @@ mirror/bfo.owl: envo-edit.owl

mirror/uberon.owl: envo-edit.owl
owltools $(OBO)/uberon.owl --remove-axiom-annotations --make-subset-by-properties -f $(KEEPRELS) --remove-dangling-annotations --remove-annotation-assertions -l -s -d --set-ontology-id $(OBO)/uberon.owl -o $@

.PRECIOUS: mirror/%.owl

mirror/po.owl: envo-edit.owl
owltools $(OBO)/po.owl --remove-annotation-assertions -l -s -d --remove-axiom-annotations --remove-dangling-annotations --make-subset-by-properties -f $(KEEPRELS) --set-ontology-id $(OBO)/po.owl -o $@
.PRECIOUS: mirror/%.owl

ncbitaxon.obo:
wget -N $(OBO)/ncbitaxon.obo
.PRECIOUS: ncbitaxon.obo

mirror/ncbitaxon.owl: ncbitaxon.obo
OWLTOOLS_MEMORY=12G owltools $< --remove-annotation-assertions -l -s -d --remove-axiom-annotations --remove-dangling-annotations --set-ontology-id $(OBO)/ncbitaxon.owl -o $@
.PRECIOUS: mirror/ncbitaxon.owl
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