0.1.0

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CHANGELOG.md

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+# CHANGELOG
+
+
+
+## v0.1.0 (2023-10-17)
+
+### Feature
+
+* feat(PipelineDesigner): Check for combination improvement ([`03152ae`](https://github.com/EUCANCan/oncoliner/commit/03152ae2522a7930b9407c512c6f2b37708c29cd))
+
+* feat: Include UI module ([`1df8532`](https://github.com/EUCANCan/oncoliner/commit/1df8532fec303b97575d7c2186a2032fbb57377e))
+
+* feat: Add example to improvement module ([`6d024f1`](https://github.com/EUCANCan/oncoliner/commit/6d024f1fe97d0028f06a02fb560d764baffc270f))
+
+* feat: Add public data example ([`40cb24d`](https://github.com/EUCANCan/oncoliner/commit/40cb24db518059a0c5b52e7031f99accd9feef38))
+
+* feat: Complete pipeline designer ([`775caaa`](https://github.com/EUCANCan/oncoliner/commit/775caaae46150e23e0b24906b835688fbae1eafd))
+
+* feat: Add pipeline designer tool ([`d17058d`](https://github.com/EUCANCan/oncoliner/commit/d17058d3319f21bc4a7d5eab9b39f87ee4d09ccc))
+
+* feat: Add Dockerfile and singularity.def ([`4f6d8c6`](https://github.com/EUCANCan/oncoliner/commit/4f6d8c66e96fbd2455b898fcbd5255395f0bf55d))
+
+* feat: Add improvement and harmonization ([`26c2418`](https://github.com/EUCANCan/oncoliner/commit/26c2418d338ce7df98a126ca3ff8e205390afe29))
+
+* feat: Include assesment module ([`08090f2`](https://github.com/EUCANCan/oncoliner/commit/08090f2967f8ddd79b890225c6893442d53d315a))
+
+* feat: Add harmonization and UI ([`7b7623a`](https://github.com/EUCANCan/oncoliner/commit/7b7623a2ea033a484d2519fbd8e4537cd80b4dfb))
+
+* feat: Integrate with evaluation module ([`4876ebb`](https://github.com/EUCANCan/oncoliner/commit/4876ebb018481ea00f735bfb320513d43c7dd0a5))
+
+### Fix
+
+* fix: Add vcf_ops command tools ([`99972af`](https://github.com/EUCANCan/oncoliner/commit/99972af37b1aad83d5cfede479425c01f184a2f9))
+
+* fix: Update Docker and Singularity recipies ([`59deac9`](https://github.com/EUCANCan/oncoliner/commit/59deac9790c46fd213e5a36a15477dfb8278da4c))
+
+* fix(UI): Change minification packages ([`683e3fa`](https://github.com/EUCANCan/oncoliner/commit/683e3fa97fa12d546d116109563f5fc1770fd6db))
+
+* fix(UI): Add missing columns ([`a3731df`](https://github.com/EUCANCan/oncoliner/commit/a3731df9206015e98366dc11898c47e9da41913d))
+
+* fix(UI): Remove empty warnings ([`6ea051d`](https://github.com/EUCANCan/oncoliner/commit/6ea051d7f720d4527c67a478c255f93b2a90b0e4))
+
+* fix: Change to window_radius in harmonization ([`45e28fb`](https://github.com/EUCANCan/oncoliner/commit/45e28fb6276d0e367d2e26be07e5936aa0e03ba0))
+
+* fix: Fix container files ([`20f8497`](https://github.com/EUCANCan/oncoliner/commit/20f84975edaef73c508a2d1a726dab8e22211034))
+
+* fix: Remove deprecated .warn ([`07742e4`](https://github.com/EUCANCan/oncoliner/commit/07742e4c7af8385cf6dee39b9742d874c7c466bc))
+
+* fix: Change to warning if pipeline folder has more samples than config ([`567d042`](https://github.com/EUCANCan/oncoliner/commit/567d042eb7006185b5ec59e177d06c09fffb5512))