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Enable vega gpu #215

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Dec 3, 2024
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89 changes: 45 additions & 44 deletions config/izum_vega.py
Original file line number Diff line number Diff line change
Expand Up @@ -68,50 +68,51 @@
},
'descr': 'CPU partition Standard, see https://en-doc.vega.izum.si/architecture/'
},
# {
# 'name': 'gpu',
# 'scheduler': 'slurm',
# 'prepare_cmds': [
# common_eessi_init(),
# # Pass job environment variables like $PATH, etc., into job steps
# 'export SLURM_EXPORT_ENV=ALL',
# # Needed when using srun launcher
# # 'export SLURM_MPI_TYPE=pmix', # WARNING: this broke the GROMACS on Vega
# # Avoid https://github.com/EESSI/software-layer/issues/136
# # Can be taken out once we don't care about old OpenMPI versions anymore (pre-4.1.1)
# 'export OMPI_MCA_pml=ucx',
# ],
# 'launcher': 'mpirun',
# # Use --export=None to avoid that login environment is passed down to submitted jobs
# 'access': ['-p gpu', '--export=None'],
# 'environs': ['default'],
# 'max_jobs': 60,
# 'devices': [
# {
# 'type': DEVICE_TYPES[GPU],
# 'num_devices': 4,
# }
# ],
# 'resources': [
# {
# 'name': '_rfm_gpu',
# 'options': ['--gpus-per-node={num_gpus_per_node}'],
# },
# {
# 'name': 'memory',
# 'options': ['--mem={size}'],
# }
# ],
# 'features': [
# FEATURES[GPU],
# ] + list(SCALES.keys()),
# 'extras': {
# # Make sure to round down, otherwise a job might ask for more mem than is available
# # per node
# 'mem_per_node': 476.837 * 1024 # in MiB (should be checked, its unclear from slurm.conf)
# },
# 'descr': 'GPU partition, see https://en-doc.vega.izum.si/architecture/'
# },
{
'name': 'gpu',
'scheduler': 'slurm',
'prepare_cmds': [
common_eessi_init(),
# Pass job environment variables like $PATH, etc., into job steps
'export SLURM_EXPORT_ENV=ALL',
# Needed when using srun launcher
# 'export SLURM_MPI_TYPE=pmix', # WARNING: this broke the GROMACS on Vega
# Avoid https://github.com/EESSI/software-layer/issues/136
# Can be taken out once we don't care about old OpenMPI versions anymore (pre-4.1.1)
'export OMPI_MCA_pml=ucx',
],
'launcher': 'mpirun',
# Use --export=None to avoid that login environment is passed down to submitted jobs
'access': ['-p gpu', '--export=None'],
'environs': ['default'],
'max_jobs': 60,
'devices': [
{
'type': DEVICE_TYPES[GPU],
'num_devices': 4,
}
],
'resources': [
{
'name': '_rfm_gpu',
'options': ['--gpus-per-node={num_gpus_per_node}'],
},
{
'name': 'memory',
'options': ['--mem={size}'],
}
],
'features': [
FEATURES[GPU],
] + list(SCALES.keys()),
'extras': {
GPU_VENDOR: GPU_VENDORS[NVIDIA],
# Make sure to round down, otherwise a job might ask for more mem than is available
# per node
'mem_per_node': 476.837 * 1024 # in MiB (should be checked, its unclear from slurm.conf)
},
'descr': 'GPU partition, see https://en-doc.vega.izum.si/architecture/'
},
]
},
],
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