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Allow sending additional args to singularity in build script #367

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Allow sending additional args to singularity in build script #367

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14 changes: 8 additions & 6 deletions build_container.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -5,12 +5,14 @@ base_dir=$(dirname $(realpath $0))
BUILD_CONTAINER="docker://ghcr.io/eessi/build-node:debian11"

if [ $# -lt 2 ]; then
echo "Usage: $0 <shell|run> <path for temporary directories>" >&2
echo "Usage: $0 <shell|run> <path for temporary directories> <extra arguments for singularity (optional)>" >&2
exit 1
fi
SHELL_OR_RUN=$1
EESSI_TMPDIR=$2
shift 2
EXTRA_ARGS_SINGULARITY=$3

shift 3

if [ "$SHELL_OR_RUN" == "run" ] && [ $# -eq 0 ]; then
echo "ERROR: No command specified to run?!" >&2
Expand All @@ -24,12 +26,12 @@ echo "Using $EESSI_TMPDIR as parent for temporary directories..."

# create temporary directories
mkdir -p $EESSI_TMPDIR/{home,overlay-upper,overlay-work}
mkdir -p $EESSI_TMPDIR/{var-lib-cvmfs,var-run-cvmfs}
mkdir -p $EESSI_TMPDIR/{var-lib-cvmfs,var-run-cvmfs,opt-eessi}
# configure Singularity
export SINGULARITY_CACHEDIR=$EESSI_TMPDIR/singularity_cache

# take into account that $SINGULARITY_BIND may be defined already, to bind additional paths into the build container
BIND_PATHS="$EESSI_TMPDIR/var-run-cvmfs:/var/run/cvmfs,$EESSI_TMPDIR/var-lib-cvmfs:/var/lib/cvmfs,$EESSI_TMPDIR"
BIND_PATHS="$EESSI_TMPDIR/var-run-cvmfs:/var/run/cvmfs,$EESSI_TMPDIR/var-lib-cvmfs:/var/lib/cvmfs,$EESSI_TMPDIR/opt-eessi:/opt/eessi,$EESSI_TMPDIR"
if [ -z $SINGULARITY_BIND ]; then
export SINGULARITY_BIND="$BIND_PATHS"
else
Expand Down Expand Up @@ -59,10 +61,10 @@ fi
if [ "$SHELL_OR_RUN" == "shell" ]; then
# start shell in Singularity container, with EESSI repository mounted with writable overlay
echo "Starting Singularity build container..."
singularity shell --fusemount "$EESSI_PILOT_READONLY" --fusemount "$EESSI_PILOT_WRITABLE_OVERLAY" $BUILD_CONTAINER
singularity shell --fusemount "$EESSI_PILOT_READONLY" --fusemount "$EESSI_PILOT_WRITABLE_OVERLAY" $EXTRA_ARGS_SINGULARITY $BUILD_CONTAINER
elif [ "$SHELL_OR_RUN" == "run" ]; then
echo "Running '$@' in Singularity build container..."
singularity exec --fusemount "$EESSI_PILOT_READONLY" --fusemount "$EESSI_PILOT_WRITABLE_OVERLAY" $BUILD_CONTAINER "$@"
singularity exec --fusemount "$EESSI_PILOT_READONLY" --fusemount "$EESSI_PILOT_WRITABLE_OVERLAY" $EXTRA_ARGS_SINGULARITY $BUILD_CONTAINER "$@"
else
echo "ERROR: Unknown action specified: $SHELL_OR_RUN (should be either 'shell' or 'run')" >&2
exit 1
Expand Down
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