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visr committed Oct 21, 2024
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111 changes: 66 additions & 45 deletions Manifest.toml
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# This file is machine-generated - editing it directly is not advised

julia_version = "1.11.0"
julia_version = "1.11.1"
manifest_format = "2.0"
project_hash = "0257f2772e4bfed0b6316b6871c4495978c173b4"

Expand Down Expand Up @@ -154,9 +154,9 @@ version = "0.1.6"

[[deps.Bzip2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "9e2a6b69137e6969bab0152632dcb3bc108c8bdd"
git-tree-sha1 = "8873e196c2eb87962a2048b3b8e08946535864a1"
uuid = "6e34b625-4abd-537c-b88f-471c36dfa7a0"
version = "1.0.8+1"
version = "1.0.8+2"

[[deps.CPUSummary]]
deps = ["CpuId", "IfElse", "PrecompileTools", "Static"]
Expand Down Expand Up @@ -382,9 +382,9 @@ version = "1.11.0"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"]
git-tree-sha1 = "9c36ac68cf6c59a1c2569aadd7a62c47ed5c8eb5"
git-tree-sha1 = "f8eefbb7e910f59087c4bb09ce670f235758ee4a"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.158.1"
version = "6.158.3"

[deps.DiffEqBase.extensions]
DiffEqBaseCUDAExt = "CUDA"
Expand Down Expand Up @@ -434,9 +434,9 @@ version = "1.15.1"

[[deps.DifferentiationInterface]]
deps = ["ADTypes", "LinearAlgebra"]
git-tree-sha1 = "758ef234ab0b81071c195cd2ea155030d69c1ef8"
git-tree-sha1 = "16611777adf4a818f18c33210895947814180964"
uuid = "a0c0ee7d-e4b9-4e03-894e-1c5f64a51d63"
version = "0.6.13"
version = "0.6.16"

[deps.DifferentiationInterface.extensions]
DifferentiationInterfaceChainRulesCoreExt = "ChainRulesCore"
Expand Down Expand Up @@ -542,6 +542,27 @@ git-tree-sha1 = "cbf5edddb61a43669710cbc2241bc08b36d9e660"
uuid = "29a986be-02c6-4525-aec4-84b980013641"
version = "2.0.4"

[[deps.FastPower]]
git-tree-sha1 = "46aee43f62bc2bc06a74e2d668ffeea0a2689c93"
uuid = "a4df4552-cc26-4903-aec0-212e50a0e84b"
version = "1.1.0"

[deps.FastPower.extensions]
FastPowerEnzymeExt = "Enzyme"
FastPowerForwardDiffExt = "ForwardDiff"
FastPowerMeasurementsExt = "Measurements"
FastPowerMonteCarloMeasurementsExt = "MonteCarloMeasurements"
FastPowerReverseDiffExt = "ReverseDiff"
FastPowerTrackerExt = "Tracker"

[deps.FastPower.weakdeps]
Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"

[[deps.FileIO]]
deps = ["Pkg", "Requires", "UUIDs"]
git-tree-sha1 = "62ca0547a14c57e98154423419d8a342dca75ca9"
Expand Down Expand Up @@ -642,9 +663,9 @@ version = "1.12.0"

[[deps.HiGHS]]
deps = ["HiGHS_jll", "MathOptInterface", "PrecompileTools", "SparseArrays"]
git-tree-sha1 = "3a7f13068f77fa54edd9589f762c600a22679bf7"
git-tree-sha1 = "555967d9fbcc5adec5362d6fc953dd11eb910250"
uuid = "87dc4568-4c63-4d18-b0c0-bb2238e4078b"
version = "1.9.3"
version = "1.10.0"

[[deps.HiGHS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Zlib_jll"]
Expand Down Expand Up @@ -757,19 +778,19 @@ version = "0.21.4"

[[deps.JSON3]]
deps = ["Dates", "Mmap", "Parsers", "PrecompileTools", "StructTypes", "UUIDs"]
git-tree-sha1 = "eb3edce0ed4fa32f75a0a11217433c31d56bd48b"
git-tree-sha1 = "1d322381ef7b087548321d3f878cb4c9bd8f8f9b"
uuid = "0f8b85d8-7281-11e9-16c2-39a750bddbf1"
version = "1.14.0"
version = "1.14.1"
weakdeps = ["ArrowTypes"]

[deps.JSON3.extensions]
JSON3ArrowExt = ["ArrowTypes"]

[[deps.JuMP]]
deps = ["LinearAlgebra", "MacroTools", "MathOptInterface", "MutableArithmetics", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays"]
git-tree-sha1 = "c95f443d4641b128d626a429b51d5185050135b5"
git-tree-sha1 = "c91f872c6150cf1471f9cb279f5e0dc09423bdcf"
uuid = "4076af6c-e467-56ae-b986-b466b2749572"
version = "1.23.2"
version = "1.23.3"

[deps.JuMP.extensions]
JuMPDimensionalDataExt = "DimensionalData"
Expand All @@ -791,14 +812,14 @@ version = "0.6.0"

[[deps.Krylov]]
deps = ["LinearAlgebra", "Printf", "SparseArrays"]
git-tree-sha1 = "267dad6b4b7b5d529c76d40ff48d33f7e94cb834"
git-tree-sha1 = "71dd823bf0a5aaa8264e1143b96a0baa631f4ce0"
uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7"
version = "0.9.6"
version = "0.9.7"

[[deps.LaTeXStrings]]
git-tree-sha1 = "50901ebc375ed41dbf8058da26f9de442febbbec"
git-tree-sha1 = "dda21b8cbd6a6c40d9d02a73230f9d70fed6918c"
uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
version = "1.3.1"
version = "1.4.0"

[[deps.LayoutPointers]]
deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"]
Expand Down Expand Up @@ -876,9 +897,9 @@ version = "1.11.0"

[[deps.LineSearch]]
deps = ["ADTypes", "CommonSolve", "ConcreteStructs", "FastClosures", "LinearAlgebra", "MaybeInplace", "SciMLBase", "SciMLJacobianOperators", "StaticArraysCore"]
git-tree-sha1 = "dc82b3c3640a4362f09e4d7594b4387a820857e4"
git-tree-sha1 = "97d502765cc5cf3a722120f50da03c2474efce04"
uuid = "87fe0de2-c867-4266-b59a-2f0a94fc965b"
version = "0.1.3"
version = "0.1.4"
weakdeps = ["LineSearches"]

[deps.LineSearch.extensions]
Expand All @@ -897,9 +918,9 @@ version = "1.11.0"

[[deps.LinearSolve]]
deps = ["ArrayInterface", "ChainRulesCore", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "LazyArrays", "Libdl", "LinearAlgebra", "MKL_jll", "Markdown", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "StaticArraysCore", "UnPack"]
git-tree-sha1 = "8941ad4bdd83768359801982e143008349b1a827"
git-tree-sha1 = "ddb60aabc5efb0670c7ddde5fedf7ab44520a3e6"
uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
version = "2.35.0"
version = "2.36.1"

[deps.LinearSolve.extensions]
LinearSolveBandedMatricesExt = "BandedMatrices"
Expand Down Expand Up @@ -970,9 +991,9 @@ weakdeps = ["ChainRulesCore", "ForwardDiff", "SpecialFunctions"]

[[deps.LoweredCodeUtils]]
deps = ["JuliaInterpreter"]
git-tree-sha1 = "96d2a4a668f5c098fb8a26ce7da53cde3e462a80"
git-tree-sha1 = "260dc274c1bc2cb839e758588c63d9c8b5e639d1"
uuid = "6f1432cf-f94c-5a45-995e-cdbf5db27b0b"
version = "3.0.3"
version = "3.0.5"

[[deps.Lz4_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
Expand Down Expand Up @@ -1015,9 +1036,9 @@ version = "1.1.0"

[[deps.MathOptInterface]]
deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"]
git-tree-sha1 = "5b246fca5420ae176d65ed43a2d0ee5897775216"
git-tree-sha1 = "c7fff4fbc415a6833988efbda7621039af2a5f36"
uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee"
version = "1.31.2"
version = "1.32.0"

[[deps.MaybeInplace]]
deps = ["ArrayInterface", "LinearAlgebra", "MacroTools"]
Expand Down Expand Up @@ -1073,9 +1094,9 @@ version = "0.2.4"

[[deps.MutableArithmetics]]
deps = ["LinearAlgebra", "SparseArrays", "Test"]
git-tree-sha1 = "7768a4e5f2b372777a90c1758809333081a096a8"
git-tree-sha1 = "90077f1e79de8c9c7c8a90644494411111f4e07b"
uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0"
version = "1.5.1"
version = "1.5.2"

[[deps.NLSolversBase]]
deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"]
Expand Down Expand Up @@ -1158,10 +1179,10 @@ uuid = "6ad6398a-0878-4a85-9266-38940aa047c8"
version = "1.1.2"

[[deps.OrdinaryDiffEqCore]]
deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "TruncatedStacktraces"]
git-tree-sha1 = "f4b7b11e2e4c0f4a7fe15d2edcec1e1ce2917d67"
deps = ["ADTypes", "Accessors", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "EnumX", "FastBroadcast", "FastClosures", "FastPower", "FillArrays", "FunctionWrappersWrappers", "InteractiveUtils", "LinearAlgebra", "Logging", "MacroTools", "MuladdMacro", "Polyester", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "SimpleUnPack", "Static", "StaticArrayInterface", "StaticArraysCore", "TruncatedStacktraces"]
git-tree-sha1 = "1175717a62ab21736a8f5d0d2531d2a6ad3b9e74"
uuid = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
version = "1.7.1"
version = "1.9.0"
weakdeps = ["EnzymeCore"]

[deps.OrdinaryDiffEqCore.extensions]
Expand Down Expand Up @@ -1211,9 +1232,9 @@ version = "0.5.6"

[[deps.PackageCompiler]]
deps = ["Artifacts", "Glob", "LazyArtifacts", "Libdl", "Pkg", "Printf", "RelocatableFolders", "TOML", "UUIDs", "p7zip_jll"]
git-tree-sha1 = "b3eefba312721f9238550f162fd1e2a7e845b3d1"
git-tree-sha1 = "f26a9bf5c7fb4bf00d9499f664742675d5e78d3a"
uuid = "9b87118b-4619-50d2-8e1e-99f35a4d4d9d"
version = "2.1.18"
version = "2.1.20"

[[deps.PackageExtensionCompat]]
git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518"
Expand Down Expand Up @@ -1372,9 +1393,9 @@ version = "1.3.0"

[[deps.Revise]]
deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "REPL", "Requires", "UUIDs", "Unicode"]
git-tree-sha1 = "2d4e5de3ac1c348fd39ddf8adbef82aa56b65576"
git-tree-sha1 = "7f4228017b83c66bd6aa4fddeb170ce487e53bc7"
uuid = "295af30f-e4ad-537b-8983-00126c2a3abe"
version = "3.6.1"
version = "3.6.2"

[[deps.Ribasim]]
deps = ["Accessors", "Arrow", "BasicModelInterface", "CodecZstd", "ComponentArrays", "Configurations", "DBInterface", "DataInterpolations", "DataStructures", "Dates", "DiffEqBase", "DiffEqCallbacks", "EnumX", "FiniteDiff", "Graphs", "HiGHS", "IterTools", "JuMP", "Legolas", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoggingExtras", "MetaGraphsNext", "OrdinaryDiffEqBDF", "OrdinaryDiffEqCore", "OrdinaryDiffEqLowOrderRK", "OrdinaryDiffEqNonlinearSolve", "OrdinaryDiffEqRosenbrock", "OrdinaryDiffEqSDIRK", "OrdinaryDiffEqTsit5", "PreallocationTools", "SQLite", "SciMLBase", "SparseArrays", "SparseConnectivityTracer", "StructArrays", "Tables", "TerminalLoggers", "TranscodingStreams"]
Expand Down Expand Up @@ -1423,10 +1444,10 @@ uuid = "76ed43ae-9a5d-5a62-8c75-30186b810ce8"
version = "3.45.3+0"

[[deps.SciMLBase]]
deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
git-tree-sha1 = "50ed64cd5ad79b0bef71fdb6a11d10c3448bfef0"
deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface"]
git-tree-sha1 = "26fea1911818cd480400f1a2b7f6b32c3cc3836a"
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
version = "2.56.1"
version = "2.56.4"

[deps.SciMLBase.extensions]
SciMLBaseChainRulesCoreExt = "ChainRulesCore"
Expand Down Expand Up @@ -1455,9 +1476,9 @@ version = "0.1.0"

[[deps.SciMLOperators]]
deps = ["Accessors", "ArrayInterface", "DocStringExtensions", "LinearAlgebra", "MacroTools"]
git-tree-sha1 = "e39c5f217f9aca640c8e27ab21acf557a3967db5"
git-tree-sha1 = "ef388ca9e4921ec5614ce714f8aa59a5cd33d867"
uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961"
version = "0.3.10"
version = "0.3.11"
weakdeps = ["SparseArrays", "StaticArraysCore"]

[deps.SciMLOperators.extensions]
Expand Down Expand Up @@ -1549,9 +1570,9 @@ version = "1.11.0"

[[deps.SparseConnectivityTracer]]
deps = ["ADTypes", "DocStringExtensions", "FillArrays", "LinearAlgebra", "Random", "SparseArrays"]
git-tree-sha1 = "35d346f6aa78814859f1f69cd4f41c24108afa00"
git-tree-sha1 = "6914df6005bab9940e2a96879a97a43e1fb1ce78"
uuid = "9f842d2f-2579-4b1d-911e-f412cf18a3f5"
version = "0.6.7"
version = "0.6.8"

[deps.SparseConnectivityTracer.extensions]
SparseConnectivityTracerDataInterpolationsExt = "DataInterpolations"
Expand Down Expand Up @@ -1700,9 +1721,9 @@ version = "7.7.0+0"

[[deps.SymbolicIndexingInterface]]
deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"]
git-tree-sha1 = "0225f7c62f5f78db35aae6abb2e5cabe38ce578f"
git-tree-sha1 = "4bc96df5d71515b1cb86dd626915f06f4c0d46f5"
uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
version = "0.3.31"
version = "0.3.33"

[[deps.TOML]]
deps = ["Dates"]
Expand Down Expand Up @@ -1844,9 +1865,9 @@ version = "1.3.0"

[[deps.ZeroMQ_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "libsodium_jll"]
git-tree-sha1 = "42f97fb27394378591666ab0e9cee369e6d0e1f9"
git-tree-sha1 = "f02ce8f0fda1ed40f4d0d59a2ad05e35e8ac9b0e"
uuid = "8f1865be-045e-5c20-9c9f-bfbfb0764568"
version = "4.3.5+0"
version = "4.3.5+1"

[[deps.Zlib_jll]]
deps = ["Libdl"]
Expand Down
2 changes: 1 addition & 1 deletion core/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -96,7 +96,7 @@ PreallocationTools = "0.4"
SQLite = "1.5.1"
SciMLBase = "2.36"
SparseArrays = "1"
SparseConnectivityTracer = "0.6.3"
SparseConnectivityTracer = "0.6.8"
StructArrays = "0.6.13"
TOML = "1"
Tables = "1"
Expand Down
2 changes: 1 addition & 1 deletion pixi.toml
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ test-ribasim-api = "pytest --basetemp=python/ribasim_api/tests/temp --junitxml=r

[feature.dev.tasks]
# Installation
install-julia = "juliaup add 1.11.0 && juliaup override unset && juliaup override set 1.11.0"
install-julia = "juliaup add 1.11.1 && juliaup override unset && juliaup override set 1.11.1"
install-pre-commit = "pre-commit install"
# Note that this has a Windows specific override
install-ci = { depends_on = ["install-julia", "update-registry-julia"] }
Expand Down

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