change inputs format, fasta.gz to fasta for the assembly, and to blas…

…tdb for the mitochondrion database
Delphine-L · Oct 30, 2023 · d223650 · d223650
1 parent 376b53f
commit d223650
Showing 1 changed file with 3 additions and 4 deletions.
diff --git a/...ows/VGP-assembly-v2/Assembly-decontamination-VGP9/Assembly-decontamination-VGP9-tests.yml b/...ows/VGP-assembly-v2/Assembly-decontamination-VGP9/Assembly-decontamination-VGP9-tests.yml
@@ -2,12 +2,11 @@
   job:
     Scaffolded assembly (fasta):
       class: File
-      path: https://www.dropbox.com/s/rl1nkrnicyhgpun/Scaffolded%20assembly%20%28fasta%29.fasta.gz?dl=1
-      filetype: fasta.gz
+      path: https://www.dropbox.com/scl/fi/78taipsjo1e2sd6vzia8q/Scaffolded_assembly.fasta?rlkey=naq41o9fkt2ltlgc2dcjbbyz4&dl=1
+      filetype: fasta
     Mitochondria Database for BLAST:
       class: File
-      path: https://www.dropbox.com/s/ymm8c4qvxuwwb4u/Refseq%20Mitochondrion%20Database.fasta.gz?dl=1
-      filetype: fasta.gz
+      path: https://www.dropbox.com/scl/fi/q7ds4z3z3tvutvqaxlj4k/nucleotide_BLAST_database.zip?rlkey=j8ywfrn1r26t1mvb3h34j9hnj&dl=1
     Database for Kraken2: viral2019-03
     Include specific intervals - Optional: null
     SAK input file - Optional: null