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  1. glencoesoftware/NGFF-Converter glencoesoftware/NGFF-Converter Public

    NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF

    Java 23 7

  2. CellProfiler/CellProfiler CellProfiler/CellProfiler Public

    An open-source application for biological image analysis

    Python 923 377

  3. CellProfiler/CellProfiler-Analyst CellProfiler/CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    Python 147 72

  4. CellProfiler/core CellProfiler/core Public

    Core classes and components used by CellProfiler

    Python 6 24

  5. ImQuick ImQuick Public

    A lightweight scientific image viewer

    Python 5 1

  6. QuantiFish QuantiFish Public

    Zebrafish embryo fluorescence quantification

    Python 3 1