Requires Java 17+, as required by htsjdk, now upgraded to 4.1.1.
This release includes a new utility, AlignmentComparison, that checks whether a SAM/BAM/CRAM file contains all of the alignments from set of input SAM/BAM/CRAM files.
Requires Java 17+, as required by htsjdk, now upgraded to 4.1.1.
This release includes a new utility, AlignmentComparison, that checks whether a SAM/BAM/CRAM file contains all of the alignments from set of input SAM/BAM/CRAM files.