Fix Github Action pytest failure #149
Workflow file for this run
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| # This workflow will run some regression tests. | |
| name: Regression Tests | |
| on: | |
| push: | |
| branches: ['master', 'devel'] | |
| pull_request: | |
| branches: '*' | |
| jobs: | |
| Pytest: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| # Add multiple Python versions here to run tests on new(er) versions. | |
| python-version: ["3.11"] | |
| # Step 1 to make GUIs work, see https://pytest-qt.readthedocs.io/en/latest/troubleshooting.html | |
| env: | |
| DISPLAY: ':99.0' | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # Step 2 to make GUIs work | |
| - uses: tlambert03/setup-qt-libs@v1 | |
| - name: Install dependencies | |
| run: | | |
| # Step 3 to make GUIs work | |
| /sbin/start-stop-daemon --start --quiet --pidfile /tmp/custom_xvfb_99.pid --make-pidfile --background --exec /usr/bin/Xvfb -- :99 -screen 0 1920x1200x24 -ac +extension GLX | |
| # Install same requirements as to be used during regression testing | |
| source $CONDA/etc/profile.d/conda.sh | |
| conda create -n pytest_env python=${{ matrix.python-version }} | |
| conda activate pytest_env | |
| conda install -y -c conda-forge --file ./tests/list_of_packages.txt || true | |
| # Install the package itself to make sure that all imports work. | |
| pip install -e .[extras,test] | |
| - name: Analysing the code with pytest | |
| run: | | |
| source $CONDA/etc/profile.d/conda.sh | |
| conda activate pytest_env | |
| # Run the actual testing of the code with pytest | |
| # Using python -m pytest is necessary because pytest has the habit of not looking in the site-packages of the venv | |
| python -m pytest -v --basetemp=./tmp -k 'test_unittests or test_gui' --cov=loadskernel --cov=modelviewer --cov=loadscompare --junitxml=testresult.xml | |
| # Create some reports | |
| coverage report | |
| coverage xml -o coverage.xml | |
| coverage html --directory ./coverage | |
| - name: Upload test restults and coverage as an artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test results and coverage | |
| path: | | |
| testresult.xml | |
| coverage.xml | |
| coverage | |
| if-no-files-found: ignore | |
| Jupyter: | |
| # Building the Jupyter book is not really a regression test. However, it has to be in this workflow due to the handling of | |
| # the artifacts. | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| # Select Python version to be used for compiling here. | |
| python-version: ["3.11"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| # Install the package itself to make sure that all imports work. | |
| pip install .[test] | |
| - name: Assemble the tutorials to a jupyter book and build htlm pages | |
| run: | | |
| jupyter-book build ./doc/tutorials | |
| # Put the html into a 2nd-level sub-folder and use 1st-level subfolder for uploading | |
| mkdir ./doc/html | |
| mv ./doc/tutorials/_build/html ./doc/html/tutorials | |
| - name: Upload Jupyter book as an artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: tutorials | |
| path: ./doc/html | |
| if-no-files-found: ignore | |
| combine-pages: | |
| runs-on: ubuntu-latest | |
| # Add a dependency to the build job | |
| needs: [Jupyter, Pytest] | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| merge-multiple: true | |
| - name: See what we've got and merge artifacts | |
| run: | | |
| ls -la | |
| mkdir pages | |
| mv ./tutorials ./pages/tutorials | |
| mv ./coverage ./pages/coverage | |
| - name: Upload artifact for pages | |
| # This is not a normal artifact but one that can be deployed to the GitHub pages in the next step | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| name: github-pages # This name may not be changed according to the documentation | |
| path: ./pages # There must be only one path | |
| if-no-files-found: ignore | |
| deploy-pages: | |
| # Add a dependency to the build job | |
| needs: combine-pages | |
| # Grant GITHUB_TOKEN the permissions required to make a Pages deployment | |
| permissions: | |
| pages: write # to deploy to Pages | |
| id-token: write # to verify the deployment originates from an appropriate source | |
| # Deploy to the github-pages environment | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Setup GitHub Pages | |
| uses: actions/configure-pages@v4 | |
| - name: Deploy to Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v4 |