added relabel to public API

Cryaaa · May 28, 2022 · 563e9d4 · 563e9d4
1 parent ee6e089
commit 563e9d4
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Showing 2 changed files with 9 additions and 4 deletions.
diff --git a/napari_skimage_regionprops/__init__.py b/napari_skimage_regionprops/__init__.py
@@ -1,6 +1,6 @@
 from ._table import add_table, get_table, TableWidget
 from ._regionprops import regionprops, regionprops_table, regionprops_table_all_frames
-from ._parametric_images import visualize_measurement_on_labels
+from ._parametric_images import visualize_measurement_on_labels, relabel
 from napari_plugin_engine import napari_hook_implementation
 from ._load_csv import load_csv
 

diff --git a/napari_skimage_regionprops/_parametric_images.py b/napari_skimage_regionprops/_parametric_images.py
@@ -17,17 +17,22 @@ def visualize_measurement_on_labels(labels_layer:"napari.layers.Labels", column:
             table = table[table['frame'] == current_timepoint]
 
     measurements = np.asarray(table[column]).tolist()
+
+    relabel(labels, measurements)
 
+def relabel(image, measurements):
     import importlib
     loader = importlib.find_loader("pyclesperanto_prototype")
     found = loader is not None
 
     if found:
-        import pyclesperanto_prototype as cle
-        return cle.pull(cle.replace_intensities(labels, numpy.asarray([0] + measurements)))
+        return relabel_cle(image, measurements)
     else:
-        return relabel_numpy(labels, measurements)
+        return relabel_numpy(image, measurements)
 
+def relabel_cle(image, measurements):
+    import pyclesperanto_prototype as cle
+    return cle.pull(cle.replace_intensities(image, numpy.asarray([0] + measurements)))
 
 def relabel_numpy(image, measurements):
     return numpy.take(numpy.array([0] + measurements), image)