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Bump version: 8.1.0 → 8.2.0
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hassanfa committed Nov 9, 2021
1 parent ffa99d1 commit 39372c5
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3 changes: 2 additions & 1 deletion .bumpversion.cfg
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[bumpversion]
current_version = 8.1.0
current_version = 8.2.0
commit = True
tag = True
tag_name = v{new_version}
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[bumpversion:file:docs/user_guide.rst]
search = {current_version}
replace = {new_version}

2 changes: 1 addition & 1 deletion BALSAMIC/__init__.py
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__version__ = "8.1.0"
__version__ = "8.2.0"
2 changes: 1 addition & 1 deletion BALSAMIC/__version__.py
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__version__ = "8.1.0"
__version__ = "8.2.0"
2 changes: 1 addition & 1 deletion BALSAMIC/containers/balsamic/Dockerfile
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Expand Up @@ -6,7 +6,7 @@ LABEL about.documentation="https://balsamic.readthedocs.io/"
LABEL about.license="MIT License (MIT)"
LABEL about.maintainer="Hassan Foroughi hassan dot foroughi at scilifelab dot se"
LABEL about.description="Bioinformatic analysis pipeline for somatic mutations in cancer"
LABEL about.version="8.1.0"
LABEL about.version="8.2.0"

ENV PATH="/opt/conda/bin/:${PATH}"
ENV MUSL_LOCPATH="/usr/share/i18n/locales/musl"
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2 changes: 1 addition & 1 deletion CITATION.cff
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Expand Up @@ -18,5 +18,5 @@ authors:
- family-names: "Wirta"
given-names: "Valtteri"
title: "BALSAMIC: Bioinformatic Analysis pipeLine for SomAtic MutatIons in Cancer"
version: v8.1.0
version: v8.2.0
url: "https://github.com/Clinical-Genomics/BALSAMIC"
4 changes: 2 additions & 2 deletions README.rst
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<a href="https://github.com/Clinical-Genomics/BALSAMIC">
<img width=480 src="https://raw.githubusercontent.com/Clinical-Genomics/BALSAMIC/master/BALSAMIC/assets/balsamic_logo.png">
</a>
<h3 align="center">Bioinformatic Analysis pipeLine for SomAtic MutatIons in Cancer (v 8.1.0)</h3>
<h3 align="center">Bioinformatic Analysis pipeLine for SomAtic MutatIons in Cancer (v 8.2.0)</h3>
<h3 align="center">FastQ to Annotated VCF</h3>
</p>

Expand Down Expand Up @@ -56,7 +56,7 @@ Snakemake cli given that there is a proper config file created.

.. |docker_latest_build_status| image:: https://github.com/Clinical-Genomics/BALSAMIC/actions/workflows/docker_build_push.yml/badge.svg

.. |docker_latest_release_status| image:: https://github.com/Clinical-Genomics/BALSAMIC/actions/workflows/docker_build_push_release.yml/badge.svg?tag=v8.1.0
.. |docker_latest_release_status| image:: https://github.com/Clinical-Genomics/BALSAMIC/actions/workflows/docker_build_push_release.yml/badge.svg?tag=v8.2.0

.. |snakemake_badge| image:: https://img.shields.io/badge/snakemake-%E2%89%A55.12.3-brightgreen.svg

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2 changes: 1 addition & 1 deletion docs/bioinfo_softwares.rst
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Workflow
========

BALSAMIC ( **version** = 8.1.0 ) uses myriad of tools and softwares to analyze fastq files. This section covers why each
BALSAMIC ( **version** = 8.2.0 ) uses myriad of tools and softwares to analyze fastq files. This section covers why each
one is included: usage and parameters, and relevant external links.


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2 changes: 1 addition & 1 deletion docs/user_guide.rst
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Short tutorial
==============

Here a short toturial is provided for BALSAMIC (**version** = 8.1.0).
Here a short toturial is provided for BALSAMIC (**version** = 8.2.0).

Running a test sample
---------------------
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