forked from LucaGiudice/Simpati
-
Notifications
You must be signed in to change notification settings - Fork 0
/
NAMESPACE
73 lines (72 loc) · 1.53 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
# Generated by roxygen2: do not edit by hand
export(Adj_Weighted_Jaccard)
export(Adj_Weighted_Jaccard_gene)
export(adj2edg)
export(area_quadr)
export(autri)
export(check_elems)
export(clean_pathways)
export(column_rank)
export(complete_m)
export(corr_AA_mat)
export(corr_BB_mat)
export(data_preparation)
export(edg2adj)
export(eig_score_adj)
export(get_A_prob)
export(get_B_prob)
export(get_KeysDis_associations)
export(get_SemType_associations)
export(get_cancerAtlas_associations)
export(get_consensus_classes)
export(get_consensus_pred)
export(get_genes_desc)
export(get_indxs)
export(get_new_info)
export(get_normalAtlas_associations)
export(get_pathway_enrich)
export(get_perfs)
export(get_power)
export(get_sign_pathways)
export(get_strength_sim)
export(get_used_pathways)
export(h_min)
export(harm_ds)
export(plot_network)
export(predict_pats)
export(reduce_net)
export(rwrProp)
export(scaling_matrix)
export(see)
export(set_variables)
export(sim_WJ)
export(strong.comm)
export(strong.comm.AA)
export(strong.comm.AA.cor)
export(strong.comm.BB)
export(strong.comm.BB.cor)
export(strong.comm.xPred2)
export(strong.comm.xPred3)
export(tune_performances)
export(twoDist)
export(vec2m)
export(vectorizing_matrix)
export(wrapper_cons)
export(wrapper_human_mutations)
import(FNN)
import(Matrix)
import(ROCR)
import(Rfast)
import(data.table)
import(doParallel)
import(foreach)
import(ggplot2)
import(igraph)
import(matrixStats)
import(parallel)
import(plyr)
import(scales)
import(stats)
importFrom(foreach,"%dopar%")
importFrom(reshape2,melt)
importFrom(stats,quantile)