Merging for a new release #188
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add pysap logo
* added TIF reader/writer * added ref to electron tomographic data * fixed docstrings in load save methods * added scikit-image in required packages * Update pysap/data.py Thanks Sam Co-authored-by: Samuel Farrens <[email protected]> * Update pysap/base/loaders/tif.py Co-authored-by: Samuel Farrens <[email protected]>
* first draft of unified docs for PySAP * fixed typo * added sphing-gallery for examples * save progress * save progress * add intersphinx mapping for modopt * updated CD build * test manual build * try github event naming * updated * update conf * added sphinx book theme to requirements * updated CD build * removed plug-in examples from base repo * updated workflow * updated CD workflow * updated pysap-astro plugin * changed how pysap sources plugins * removed stray fits file * added custom CSS for sphinx-gallery * first pass fixing pysap api data types and clean up
* deprecated pyqtgraph usage * build CFITSIO from source * added bigmac dependency for macOS * test update to conda activation * update ci matrix * clean up code style * switched to testing framework to pytest * removed Python 3.6 test case * check C compilers * check pysparse installation * added checking step to CI * test with LD_LIBRARY_PATH * Update pysap/plotting/transform.py Co-authored-by: Pierre-Antoine Comby <[email protected]> * Update pysap/configure.py Co-authored-by: Pierre-Antoine Comby <[email protected]> * add changes suggested by reviewer Co-authored-by: Pierre-Antoine Comby <[email protected]>
Remove pre-installation of pybind11
* first draft of unified docs for PySAP * fixed typo * added sphing-gallery for examples * save progress * save progress * add intersphinx mapping for modopt * updated CD build * test manual build * try github event naming * updated * update conf * added sphinx book theme to requirements * updated CD build * removed plug-in examples from base repo * updated workflow * updated CD workflow * updated pysap-astro plugin * changed how pysap sources plugins * removed stray fits file * updated documentation * added custom CSS for sphinx-gallery * first pass fixing pysap api data types and clean up * added landing page and cleaned up * added banner images * minor clean up * cleaned up reference formatting * added see also sections * changed example section sorting * fix get_data-> get_fdata --------- Co-authored-by: Chaithya G R <[email protected]>
Codecov ReportAttention:
❗ Your organization needs to install the Codecov GitHub app to enable full functionality. Additional details and impacted files@@ Coverage Diff @@
## master #188 +/- ##
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+ Coverage 61.88% 63.52% +1.64%
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Files 30 36 +6
Lines 1658 2185 +527
==========================================
+ Hits 1026 1388 +362
- Misses 632 797 +165
Flags with carried forward coverage won't be shown. Click here to find out more. ☔ View full report in Codecov by Sentry. |
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@paquiteau seems like we need one approving review (even though all the work here is approved codes) I will bypass this if needed exceptionally, but if you can just approve in your free time. |
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This is a PR to merge develop to master for a new release