Refactor pipeline filtering, create params flags for tools #148
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Changes
This PR includes the following changes:
nextflow.config
Issues
This PR addresses the following issues:
Scope
These changes have only been tested on the
--entry PHOENIX
part of the pipeline, on an AWS EC2 instance.Checklist
The following points were addressed in this PR:
CHANGE.md
with changes outlined above and a reference to the PR number.