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Updated version to 0.0.1 due to lack of inclusion of dicts
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georgeaidinis committed Nov 9, 2023
1 parent 52d8aa2 commit 940aa1d
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -3,7 +3,7 @@ FROM python:3.8-slim

LABEL IMAGE="DLMUSE"

RUN mkdir /DLMUSE/ && pip install DLMUSE==0.0.0
RUN mkdir /DLMUSE/ && pip install DLMUSE==0.0.1

# Download the model zip file
ADD https://github.com/CBICA/DLMUSE/releases/download/v0.0.0/model.zip /DLMUSE/
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8 changes: 4 additions & 4 deletions README.md
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Expand Up @@ -24,12 +24,12 @@ pip install .
### Using docker

```bash
docker pull aidinisg/dlmuse:0.0.0
docker pull aidinisg/dlmuse:0.0.1
```

## Usage

A pre-trained nnUNet model can be found in the [DLMUSE-0.0.0 release](https://github.com/CBICA/DLMUSE/releases/tag/v0.0.0) as an [artifact](https://github.com/CBICA/DLMUSE/releases/download/v0.0.0/model.zip). Feel free to use it under the package's [license](LICENSE).
A pre-trained nnUNet model can be found in the [DLMUSE-0.0.1 release](https://github.com/CBICA/DLMUSE/releases/tag/v0.0.1) as an [artifact](https://github.com/CBICA/DLMUSE/releases/download/v0.0.1/model.zip). Feel free to use it under the package's [license](LICENSE).

### Import as a python package

Expand Down Expand Up @@ -85,7 +85,7 @@ Without providing a model:
```bash
docker run --gpus all -it --rm -v /path/to/local/input:/workspace/input \
-v /path/to/local/output:/workspace/output \
aidinisg/dlmuse:0.0.0 -i input/ -o output/
aidinisg/dlmuse:0.0.1 -i input/ -o output/
```

Providing a model:
Expand All @@ -94,7 +94,7 @@ Providing a model:
docker run --gpus all -it --rm -v /path/to/local/model:/workspace/model \
-v /path/to/local/input:/workspace/input \
-v /path/to/local/output:/workspace/output \
aidinisg/dlmuse:0.0.0 -i input/ -o output/ --model model/
aidinisg/dlmuse:0.0.1 -i input/ -o output/ --model model/
```

## Contact
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