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@CBGP-UPM-INIA-PUBLIC

Centre for Plant Biotechnology and Genomics UPM INIA

Public code repository for projects at the CBGP

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  1. Bioinfo_ProgrammingChallenges Bioinfo_ProgrammingChallenges Public

    A BioRuby-based course for the Computational Biology M.Sc. Programme

    Jupyter Notebook 9 68

  2. Accelerated_Intro_to_CompBio_Part_1 Accelerated_Intro_to_CompBio_Part_1 Public

    Part 1 of the "Accelerated intro to Computational Biology for Biologists" course for the Master's Programme in Computational Biology, Universidad Politecnica de Madrid. This covers the first 2 days…

    Jupyter Notebook 4 24

  3. Accelerated_Intro_to_CompBio_Part_2 Accelerated_Intro_to_CompBio_Part_2 Public

    Part 2 of the "Accelerated intro to Computational Biology for Biologists" course for the Master's Programme in Computational Biology, Universidad Politecnica de Madrid. This covers the first 2 week…

    Jupyter Notebook 2 79

  4. Accelerated_Intro_WilkinsonExams Accelerated_Intro_WilkinsonExams Public

    Exam Questions and instructions for the Accellerated Introduction to Computational Biology M.Sc. course - Wilkinson Section

    Jupyter Notebook 2 75

  5. Accelerated_Advanced_Python_weeks3_4 Accelerated_Advanced_Python_weeks3_4 Public

    This repository contains jupyter notebooks for weeks 3 and 4 of Accelerated Computational Biology class. This tutorial will cover advanced NumPy lectures including several algorithms used for data …

    Jupyter Notebook 1 51

  6. BioinformaticsRetos-1-4 BioinformaticsRetos-1-4 Public

    First four lectures for the Bioinformatics Programming Challenges course

    Jupyter Notebook 1 22

Repositories

Showing 10 of 13 repositories
  • FiaB_Masters Public
    CBGP-UPM-INIA-PUBLIC/FiaB_Masters’s past year of commit activity
    Shell 0 MIT 0 0 0 Updated Nov 24, 2023
  • Bioinfo_ProgrammingChallenges Public

    A BioRuby-based course for the Computational Biology M.Sc. Programme

    CBGP-UPM-INIA-PUBLIC/Bioinfo_ProgrammingChallenges’s past year of commit activity
    Jupyter Notebook 9 68 0 0 Updated Jul 20, 2023
  • FLAIR-GG Public

    Code for the FLAIR-GG Interoperable Germplasm Project

    CBGP-UPM-INIA-PUBLIC/FLAIR-GG’s past year of commit activity
    0 MIT 0 1 0 Updated Apr 26, 2023
  • FAIR-Stewardship-Extraordinary-Assignment Public
    CBGP-UPM-INIA-PUBLIC/FAIR-Stewardship-Extraordinary-Assignment’s past year of commit activity
    JavaScript 0 MIT 1 0 0 Updated Feb 8, 2023
  • FAIR-Stewardship-Final-Exam Public

    The configuration and docker-compose for the final assignment in the FAIR Stewardship Course

    CBGP-UPM-INIA-PUBLIC/FAIR-Stewardship-Final-Exam’s past year of commit activity
    JavaScript 0 Apache-2.0 0 0 0 Updated Feb 8, 2023
  • FAIR-Stewardship-FDP Public

    A minimal FAIR Data Point "in a box" for the UPM FAIR Data Stewardship course

    CBGP-UPM-INIA-PUBLIC/FAIR-Stewardship-FDP’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Dec 4, 2022
  • BioinformaticsRetos-5-8 Public

    Lectures 5 to 8 of the Bioinformatics Challenges course

    CBGP-UPM-INIA-PUBLIC/BioinformaticsRetos-5-8’s past year of commit activity
    Jupyter Notebook 1 MIT 12 0 0 Updated Nov 23, 2022
  • BioinformaticsRetos-1-4 Public

    First four lectures for the Bioinformatics Programming Challenges course

    CBGP-UPM-INIA-PUBLIC/BioinformaticsRetos-1-4’s past year of commit activity
    Jupyter Notebook 1 MIT 22 0 0 Updated Oct 19, 2022
  • Accelerated_Advanced_Python_weeks3_4 Public

    This repository contains jupyter notebooks for weeks 3 and 4 of Accelerated Computational Biology class. This tutorial will cover advanced NumPy lectures including several algorithms used for data analysis in computational biology

    CBGP-UPM-INIA-PUBLIC/Accelerated_Advanced_Python_weeks3_4’s past year of commit activity
    Jupyter Notebook 1 51 0 0 Updated Sep 17, 2022
  • Accelerated_Intro_to_CompBio_Part_2 Public

    Part 2 of the "Accelerated intro to Computational Biology for Biologists" course for the Master's Programme in Computational Biology, Universidad Politecnica de Madrid. This covers the first 2 weeks (~24 hours) of material, taught by Mark Wilkinson.

    CBGP-UPM-INIA-PUBLIC/Accelerated_Intro_to_CompBio_Part_2’s past year of commit activity
    Jupyter Notebook 2 79 0 1 Updated Apr 7, 2022
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