This repository contains the code necessary for generating figures related to the manuscript titled "Trial-history biases in evidence accumulation can give rise to apparent lapses."
The associated data for this manuscript can be found at dx.doi.org/10.6084/m9.figshare.24113793
To reproduce the figures presented in the paper, follow these steps:
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Clone this repository to your local machine using your preferred method.
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Download the required data from the figshare link provided above.
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Edit the following paths in the
master_startup.mfile:- Base directory (
path.base) - Data directory (
path.data_save) - Source data directory (`path.mat_save')
- Directory for saving figures (
path.fig_save)
- Base directory (
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Run the
make_figures.mscript to generate the main figures. Supplementary figure code can be found in their respective folders.
This should take less than 10 minutes to run on a Mac with 96GB memory.
The fits to accumulator models were performed using code developed within the Julia package available at https://github.com/Brody-Lab/PulseInputDDM.
If you are interested in using this code or have any questions, please feel free to get in touch with us at [email protected].
This code has been tested with Matlab R2020a on Mac OS 13.2.
For any inquiries related to the manuscript or this repository, don't hesitate to reach out.