changed fig2 noteook and added github action to test

.github/workflows/exectue_notebook.yaml

@@ -0,0 +1,38 @@
+name: Execute notebook
+
+on: [push]
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        version:
+          - '1.10'
+        os:
+          - ubuntu-latest
+        arch:
+          - x64
+    steps:
+      - uses: actions/checkout@v3
+      - uses: julia-actions/setup-julia@v1
+        with:
+          version: ${{ matrix.version }}
+          arch: ${{ matrix.arch }}
+      - uses: julia-actions/julia-buildpkg@latest
+      - uses: yaananth/run-notebook@v2
+        env:
+          RUNNER: ${{ toJson(runner) }}
+          SECRETS: ${{ toJson(secrets) }}
+          GITHUB: ${{ toJson(github) }}
+        with:
+          notebook: "/notebooks/Fig2.ipynb"
+          isReport: False
+          poll: True
+      - uses: actions/upload-artifact@v3
+        if: always()
+        with:
+          name: output
+          path: ${{ RUNNER.temp }}/nb-runner
+        env:
+          RUNNER: ${{ toJson(runner) }}

notebooks/Fig2.ipynb

@@ -1051,8 +1051,9 @@
     "ax[j].set_xlim(-55, 55)\n",
     "\n",
     "tight_layout() \n",
+    "display(gcf())\n",
     "\n",
-    "PyPlot.savefig(joinpath(abspath(joinpath(pwd(), \"..\")), \"figs/\")*\"Fig2.pdf\")"
+    "#PyPlot.savefig(joinpath(abspath(joinpath(pwd(), \"..\")), \"figs/\")*\"Fig2.pdf\")"
    ]
   },
   {