Merge pull request #129 from Brainhack-Donostia/master

Making BHD2023 = to master
Brainhack-Donostia · May 14, 2024 · 9c133ed · 9c133ed
2 parents 55d3294 + f9eea5b
commit 9c133ed
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diff --git a/_config.yml b/_config.yml
@@ -41,7 +41,7 @@ people:
       url: https://www.bcbl.eu/en/jiaqi-mo-mao   
 - name: Inés Chavarría 
   pic: inesC
-  position: Projects
+  position: Projects & Help Desk
   social:
     - title: firefox
       url: https://www.bcbl.eu/en/ines-chavarria
@@ -69,6 +69,13 @@ people:
   social:
     - title: firefox
       url: https://www.bcbl.eu/en/leandro-lecca
+- name: Lucía Manso
+  pic: LuciaM
+  position: Design
+  social:
+    - title: firefox
+      url: https://www.bcbl.eu/en/lucia-manso
+
 - name: Leandro Lecca
   pic: leandroL
   position: IT 

diff --git a/_includes/projects.html b/_includes/projects.html
@@ -2,7 +2,7 @@
 <html>
 
 <!-- Services Section -->
-    <section id="Projects">
+    <section id="projects">
         <div class="container">
             <div class="row">
                 <div class="col-lg-12 text-center">
@@ -30,13 +30,55 @@ <h3 class="section-heading">Tedana: TE-dependent analysis<br/> <a href="https://
 		    <h3 class="section-subsubheading text-muted">
 			    Goals</h3>
 		    <p class="text-muted"> Follow the BHD2023 goals discussion at: <a href="https://github.com/ME-ICA/tedana/discussions/987">github discussion page</a><br /> </p>
+
+		<hr>
+		    <!-- divition for project3-->
+		    <h3 class="section-heading">Spyking AI: building a cortical inspired network <br/> <a href="https://github.com/marco7877/"> (@marco7877)</a> </h3>
+
+		    <p class="text-muted"> This project aims to build a Tensorflow wrapper to build and train spiking neuron arrays connected though hebbian conections. This tool is proposed to study neural mechanisms during cognitive events, i.e., language production/comprehension </p>
+		    <h3 class="section-subsubheading text-muted">
+			    Goals</h3>
+		    <p class="text-muted"> Build a spiking neuron python class<br />
+Build a hebbian learning python class<br />
+Test module with one hot vectors labels<br /> </p>
+		    <hr>
+		    <!-- divition for project4-->
+		    <h3 class="section-heading">phys2CVR: a BIDS-compliant python toolbox to compute cerebrovascular reactivity mapping <br/> <a href="https://github.com/smoia"> (@smoia)</a> </h3>
+
+		    <p class="text-muted"> phys2cvr is a python toolbox that aims at offering various approaches to compute cerebrovascular mapping, starting from at least a functional MRI hypervolume.
+
+		    While not the first toolbox to compute CVR out there, I'm aiming at making something easy to adopt, a swiss knife to compute all sorts of maps to image cerebral physiology (not to denoise fMRI timeseries, for that you can check <a href= "https://github.com/physiopy/phys2denoise">phys2denoise </a>). phys2cvr should become one of the most complete tools for CVR mapping available, easy to adopt through a CLI (and, if possible, a GUI), with nice reports and plots, and allowing the highest automation through BIDS compliance. No repetition allowed thoough: for all python-based approaches out there, phys2cvr should only act as wrap around.
+All contributions are welcome - and all contributions are recognised via all-contributors guidelines (and authorship on publications). </p>
+		    <h3 class="section-subsubheading text-muted">
+			    Goals</h3>
+		    <p class="text-muted"> Go through this<a href="https://docs.google.com/document/d/1MFgwIjM5IaT7RlHtc5vzplPXZi8xaW76Fa-dLzknckA/edit?usp=sharing"> list</a> as much as possible: </p>
+
+
+		    <hr>		   
+		    <!-- divition for project5-->
+		    <h3 class="section-heading">Launchcontainers: A Python tool for launching containerized analysis on HPC<br/> <a href="https://github.com/yongninglei"> (@yongninglei)</a> </h3>
+
+		    <p class="text-muted"> Launchcontainers is a Python-based program built to automatically launch containerlized MRI processing pipelines. This program takes one config.ymal file, one container.json file, and one subject-session-list.txt file as inputs. Using 1 line of bash command, it will automatically send jobs to HPC clusters regarding your computing demands.<br />
+
+		    This program is well-suited for multi-subject, multi-scan datasets. And it will save a lot of time if you need analysis your entire dataset with different parameters multiple times.<br />
+
+		    In future versions, we are trying to add more functionality to this repository so that you can launch all the MRI data analysis pipelines such as Heudiconv, fMRIprep, pRF pipelines and etc. Please keep track of this repo and if you have any questions or suggestions, don't hesitate to contact Gari: <a href="[email protected]">[email protected]</a> and Tiger: <a href="[email protected]">[email protected]</a> </p>
+		    <h3 class="section-subsubheading text-muted">
+			    Goals</h3>
+		    <p class="text-muted"> Let more people get to know the advantages of using containers to process MRI data to improve the data availability and reproducibility<br />
+		Let beginner level users get familiar with the UNIX operation and git operation<br />
+		Add new features to launchcontainer so that it supports more MRI processing pipeline (ie. HeuDiconv, fMRIprep, PRF-analyze)<br /> </p>
+
+
+<hr>
+
 		    <!-- divition for button -->
 		    <hr>
 		    <div class="container">
                         <div class="intro-text">
                             <div class="intro-lead-in"></div>
                             <div class="intro-heading"> </div>
-                            <a href=" https://github.com/brainhackorg/global2023/issues" class="page-scroll btn btn-xl">See all Brainhack Global projects </a> 
+                            <a href=" https://github.com/brainhackorg/global2023/issues" class="page-scroll btn btn-xl">See all Brainhack Git project page </a> 
                         </div>
                     </div>
                                    </div>

diff --git a/_includes/services.html b/_includes/services.html
@@ -14,7 +14,7 @@ <h3 class="section-heading">What is Brainhack Donostia?</h3>
                     <p class="text-muted"> A gender-balanced board of researchers from BCBL invites you to join a three-day in-person workshop focused on project development to foster new ideas, findings and future collaborations. In addition, we will host four international keynote speakers that will share their experience on state of the art methods, good practices in science and hot topics in research nowadays. By doing so, we will continue to grow our contributions towards sharing knowledge openly and transparently across disciplines and specialties, and to the development of open-source tools. <br />
                     Accessibility to science is an important objective for BHD 2023 and we are determined in making this year's event more inclusive and open. A CART system (*Communication Access Realtime Translation) will be provided during all talks and tutorials in order to ensure fluid and intelligible subtitles for deaf and hard of hearing participants. This system is also a valuable aid for all those participants who are not native speakers of English. <br /> 
                     BHD 2023 will award 10 travel grants to help cover travel and registration costs for the event. Through these travel awards we want to encourage and promote the participation of junior scientists who have less access to fundings. Awards will be assigned based on statements of purposes provided by the participants themselves, which will be assessed by our committee. If you would like to be considered for one of these travel grants, feel free to click on the following button and to fill out the form. You will be asked to write a short statement of purpose on why you believe this grant could help you attend BHD 2023. <br />
-                    The deadline for the statement of purpose submission is the 30th of October. The grants will be awarded on the 6th of November. If you have any questions about this process, feel free to contact us at [email protected] .</p>
+                    The deadline for the statement of purpose submission is the 8th of November. The grants will be awarded in the following days. If you have any questions about this process, feel free to contact us at [email protected] .</p>
 
                     <div class="container">
                         <div class="intro-text">

diff --git a/img/team/LuciaM.jpg b/img/team/LuciaM.jpg